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# STOCKHOLM 1.0
#=GF ID 7kD_DNA_binding
#=GF AC PF02294.20
#=GF DE 7kD DNA-binding domain
#=GF AU Mian N;0000-0003-4284-4749
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Pfam-B_8148 (release 5.2)
#=GF GA 25.00 25.00;
#=GF TC 26.60 46.20;
#=GF NC 23.20 19.20;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF CL CL0049
#=GF RN [1]
#=GF RM 3130377
#=GF RT Microsequence analysis of DNA-binding proteins 7a, 7b, and 7e
#=GF RT from the archaebacterium Sulfolobus acidocaldarius.
#=GF RA Choli T, Wittmann-Liebold B, Reinhardt R;
#=GF RL J Biol Chem 1988;263:7087-7093.
#=GF DR INTERPRO; IPR003212;
#=GF DR SCOP; 1sso; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This family contains members of the hyper-thermophilic
#=GF CC archaebacterium 7kD DNA-binding/endoribonuclease P2 family.
#=GF CC There are five 7kD DNA-binding proteins, 7a-7e, found as
#=GF CC monomers in the cell. Protein 7e shows the tightest DNA-binding
#=GF CC ability.
#=GF SQ 3
#=GS DN7_METS5/4-61 AC A4YEA2.1
#=GS DN7A_SACS2/3-61 AC P61991.2
#=GS DN7A_SACS2/3-61 DR PDB; 1SSO A; 2-60;
#=GS DN7A_SACS2/3-61 DR PDB; 1JIC A; 2-60;
#=GS DN7A_SACS2/3-61 DR PDB; 2CVR A; 2-60;
#=GS DN7A_SACS2/3-61 DR PDB; 1B4O A; 2-60;
#=GS DN7E_SULAC/3-60 AC P13125.2
DN7_METS5/4-61 KIKFKYKGQDLEVDISKVKKVWKVGKMVSFTYDD.NGKTGRGAVSEKDAPKELLNMIGK
DN7A_SACS2/3-61 TVKFKYKGEEKQVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEK
#=GR DN7A_SACS2/3-61 SS EEEEESSSSEEEEETTTEEEEEESSSSEEEEEE-SSSSEEEEEEETTTS-CHHHHHHTT
DN7E_SULAC/3-60 KVRFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDD.NGKTGRGAVSEKDAPKELMDMLAR
#=GC SS_cons EEEEESSSSEEEEETTTEEEEEESSSSEEEEEE-SSSSEEEEEEETTTS-CHHHHHHTT
#=GC seq_cons KVKFKYKGEEKEVDISKIKKVWRVGKMVSFTYDD.NGKTGRGAVSEKDAPKELLsMLuK
//
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