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********************************************************************************
MAST - Motif Alignment and Search Tool
********************************************************************************
MAST version 5.0.1 (Release date: Wed Aug 22 15:26:53 2018 -0700)
For further information on how to interpret these results please access http://meme-suite.org.
To get a copy of the MAST software please access http://meme-suite.org.
********************************************************************************
********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
********************************************************************************
********************************************************************************
DATABASE AND MOTIFS
********************************************************************************
DATABASE adh.s (peptide)
Last updated on Tue Jun 20 11:02:46 2017
Database contains 33 sequences, 9996 residues
MOTIFS meme.adh.de.oops.html (peptide)
MOTIF ID ALT ID WIDTH BEST POSSIBLE MATCH
----- ------------ ------ ----- -------------------
1 EDLAGKNIRVTG MEME-1 12 MDYQPKNIWVTG
2 ASSGIGKATAKA MEME-2 12 CSSGIGKATAKH
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1
----- -----
2 0.13
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
********************************************************************************
********************************************************************************
SECTION I: HIGH-SCORING SEQUENCES
********************************************************************************
- Each of the following 33 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
o finding the score of the single best match of each motif
to the sequence (best matches may overlap),
o calculating the sequence p-value of each score,
o forming the product of the p-values,
o taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
********************************************************************************
SEQUENCE NAME DESCRIPTION E-VALUE LENGTH
------------- ----------- -------- ------
ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXYB... 3.1e-14 248
DHII_HUMAN CORTICOSTEROID 11-BETA-DEH... 1.6e-11 292
YINL_LISMO HYPOTHETICAL 26.8 KD PROTE... 6.8e-11 248
FIXR_BRAJA FIXR PROTEIN 7.8e-11 278
HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DEH... 7.8e-10 255
BUDC_KLETE ACETOIN(DIACETYL) REDUCTAS... 2.4e-09 241
AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP27) 4.1e-09 244
FVT1_HUMAN no comment 4.3e-09 332
YRTP_BACSU HYPOTHETICAL 25.3 KD PROTE... 8.2e-09 238
DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDR... 8e-08 270
HDE_CANTR HYDRATASE-DEHYDROGENASE-EP... 1.5e-07 906
3BHD_COMTE 3-BETA-HYDROXYSTEROID DEHY... 1.9e-07 253
BDH_HUMAN D-BETA-HYDROXYBUTYRATE DEH... 2.5e-07 343
2BHD_STREX 20-BETA-HYDROXYSTEROID DEH... 3.8e-07 255
BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DEH... 4.1e-07 249
RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (E... 6.5e-07 249
DHGB_BACME GLUCOSE 1-DEHYDROGENASE B ... 6.7e-07 262
PCR_PEA no comment 9e-07 399
RFBB_NEIGO no comment 1.6e-06 346
BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDROG... 2.2e-06 275
DHB2_HUMAN no comment 3.2e-06 387
NODG_RHIME NODULATION PROTEIN G (HOST... 3.5e-06 245
MAS1_AGRRA no comment 6.2e-06 476
DHCA_HUMAN no comment 6.7e-06 276
DHES_HUMAN ESTRADIOL 17 BETA-DEHYDROG... 9.5e-06 327
DHB3_HUMAN no comment 1.9e-05 310
HMTR_LEIMA no comment 2.7e-05 287
ADH_DROME ALCOHOL DEHYDROGENASE (EC ... 6.2e-05 255
YURA_MYXXA no comment 0.00013 258
LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC ... 0.00014 305
FABI_ECOLI no comment 0.00018 262
GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DEH... 0.0031 259
CSGA_MYXXA no comment 0.0074 166
********************************************************************************
********************************************************************************
SECTION II: MOTIF DIAGRAMS
********************************************************************************
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
o -d- `d' residues separate the end of the preceding motif
occurrence and the start of the following motif occurrence
o [n] occurrence of motif `n' with p-value less than 0.0001.
********************************************************************************
SEQUENCE NAME E-VALUE MOTIF DIAGRAM
------------- -------- -------------
ENTA_ECOLI 3.1e-14 [1]-[2]-224
DHII_HUMAN 1.6e-11 29-[1]-[2]-239
YINL_LISMO 6.8e-11 [1]-[2]-224
FIXR_BRAJA 7.8e-11 43-[2]-149-[1]-62
HDHA_ECOLI 7.8e-10 6-[1]-[2]-144-[1]-69
BUDC_KLETE 2.4e-09 9-[2]-53-[1]-81-[1]-62
AP27_MOUSE 4.1e-09 2-[1]-[2]-138-[1]-68
FVT1_HUMAN 4.3e-09 39-[2]-150-[1]-119
YRTP_BACSU 8.2e-09 1-[1]-[2]-145-[1]-56
DHMA_FLAS1 8e-08 9-[1]-[2]-147-[1]-78
HDE_CANTR 1.5e-07 3-[1]-[2]-290-[1]-[2]-565
3BHD_COMTE 1.9e-07 1-[1]-[2]-50-[1]-166
BDH_HUMAN 2.5e-07 50-[1]-[2]-269
2BHD_STREX 3.8e-07 1-[1]-[2]-142-[1]-76
BA72_EUBSP 4.1e-07 1-[1]-[2]-125-[2]-10-[1]-65
RIDH_KLEAE 6.5e-07 9-[1]-[2]-216
DHGB_BACME 6.7e-07 2-[1]-[2]-149-[1]-75
PCR_PEA 9e-07 81-[1]-[2]-108-[1]-174
RFBB_NEIGO 1.6e-06 1-[1]-[2]-321
BPHB_PSEPS 2.2e-06 [1]-[2]-251
DHB2_HUMAN 3.2e-06 77-[1]-[2]-286
NODG_RHIME 3.5e-06 1-[1]-[2]-142-[1]-66
MAS1_AGRRA 6.2e-06 252-[2]-36-[1]-164
DHCA_HUMAN 6.7e-06 11-[2]-54-[1]-101-[1]-74
DHES_HUMAN 9.5e-06 9-[2]-108-[1]-186
DHB3_HUMAN 1.9e-05 55-[2]-146-[1]-85
HMTR_LEIMA 2.7e-05 24-[2]-172-[1]-67
ADH_DROME 6.2e-05 13-[2]-217-[1]-1
YURA_MYXXA 0.00013 94-[2]-69-[1]-71
LIGD_PSEPA 0.00014 1-[1]-[2]-280
FABI_ECOLI 0.00018 1-[1]-161-[1]-76
GUTD_ECOLI 0.0031 147-[2]-10-[1]-78
CSGA_MYXXA 0.0074 12-[1]-53-[2]-77
********************************************************************************
********************************************************************************
SECTION III: ANNOTATED SEQUENCES
********************************************************************************
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
o the motif number of the occurrence,
o the position p-value of the occurrence,
o the best possible match to the motif, and
o columns whose match to the motif has a positive score (indicated
by a plus sign).
********************************************************************************
ENTA_ECOLI
2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE (EC 1.3.1.28)
LENGTH = 248 COMBINED P-VALUE = 9.46e-16 E-VALUE = 3.1e-14
DIAGRAM: [1]-[2]-224
[1] [2]
1.3e-12 3.4e-10
MDYQPKNIWVTGCSSGIGKATAKH
++++++++++++++++++++++++
1 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDA
DHII_HUMAN
CORTICOSTEROID 11-BETA-DEHYDROGENASE (EC 1.1.1.146) (11-DH) (11-BETA-
HYDROXYSTEROID DEHYDROGENASE) (11-BETA-HSD)
LENGTH = 292 COMBINED P-VALUE = 4.98e-13 E-VALUE = 1.6e-11
DIAGRAM: 29-[1]-[2]-239
[1] [2]
8.4e-10 2.3e-10
MDYQPKNIWVTGCSSGIGKATAKH
++++++++++++++++++++++++
1 MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV
YINL_LISMO
HYPOTHETICAL 26.8 KD PROTEIN IN INLA 5'REGION (ORFA)
LENGTH = 248 COMBINED P-VALUE = 2.07e-12 E-VALUE = 6.8e-11
DIAGRAM: [1]-[2]-224
[1] [2]
1.0e-08 1.2e-10
MDYQPKNIWVTGCSSGIGKATAKH
++++ ++++++++++++++++++
1 MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQIIKANSGEAIFAKTDVTKREDNKKLVEL
FIXR_BRAJA
FIXR PROTEIN
LENGTH = 278 COMBINED P-VALUE = 2.35e-12 E-VALUE = 7.8e-11
DIAGRAM: 43-[2]-149-[1]-62
[2]
2.6e-11
CSSGIGKATAKH
+++++++++++
1 MGLDLPNDNLIRGPLPEAHLDRLVDAVNARVDRGEPKVMLLTGASRGIGHATAKLFSEAGWRIISCARQPFDGER
[1]
4.1e-08
MDYQPKNIWVTG
+++++++++++
151 APILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTD
HDHA_ECOLI
7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (HSDH)
LENGTH = 255 COMBINED P-VALUE = 2.38e-11 E-VALUE = 7.8e-10
DIAGRAM: 6-[1]-[2]-144-[1]-69
[1] [2]
3.2e-06 1.3e-08
MDYQPKNIWVTGCSSGIGKATAKH
+++ ++ +++++++ +++++++++
1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL
[1]
1.1e-09
MDYQPKNIWVTG
+++++++++++
151 NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIA
BUDC_KLETE
ACETOIN(DIACETYL) REDUCTASE (EC 1.1.1.5) (ACETOIN DEHYDROGENASE)
LENGTH = 241 COMBINED P-VALUE = 7.19e-11 E-VALUE = 2.4e-09
DIAGRAM: 9-[2]-53-[1]-81-[1]-62
[2] [
3.4e-10 3
CSSGIGKATAKH M
++++++++++++ +
1 MQKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATATAVAAEINQAGGRAVAIKVDVSRRDQVFAAVEQARK
1]
.4e-05
DYQPKNIWVTG
+++ +++++
76 ALGGFNVIVNNAGIAPSTPIESITEEIVDRVYNINVKGVIWGMQAAVEAFKKEGHGGKIVNACSQAGHVGNPELA
[1]
1.5e-07
MDYQPKNIWVTG
+++++ ++++++
151 VYSSSKFAVRGLTQTAARDLAPLGITVNGFCPGIVKTPMWAEIDRQCRKRRANRWATARLNLPNASPLAACRSLK
AP27_MOUSE
ADIPOCYTE P27 PROTEIN (AP27)
LENGTH = 244 COMBINED P-VALUE = 1.25e-10 E-VALUE = 4.1e-09
DIAGRAM: 2-[1]-[2]-138-[1]-68
[1] [2]
8.5e-06 1.0e-08
MDYQPKNIWVTGCSSGIGKATAKH
+ +++ +++++++++++++ ++++
1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIG
[1]
8.1e-09
MDYQPKNIWVTG
+++++++++++
151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD
FVT1_HUMAN
no comment
LENGTH = 332 COMBINED P-VALUE = 1.29e-10 E-VALUE = 4.3e-09
DIAGRAM: 39-[2]-150-[1]-119
[2]
3.8e-10
CSSGIGKATAKH
++++++++++++
1 MLLLAAAFLVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKE
[1]
1.2e-07
MDYQPKNIWVTG
+++++++++++
151 YPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFA
YRTP_BACSU
HYPOTHETICAL 25.3 KD PROTEIN IN RTP 5'REGION (ORF238)
LENGTH = 238 COMBINED P-VALUE = 2.48e-10 E-VALUE = 8.2e-09
DIAGRAM: 1-[1]-[2]-145-[1]-56
[1] [2]
1.3e-06 4.3e-10
MDYQPKNIWVTGCSSGIGKATAKH
+ ++ + +++++++++++++++++
1 MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVA
[1]
4.2e-07
MDYQPKNIWVTG
+++++++++++
151 VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTDGNPEKVMQPEDLAEYMVAQLKLDPR
DHMA_FLAS1
N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH)
LENGTH = 270 COMBINED P-VALUE = 2.41e-09 E-VALUE = 8e-08
DIAGRAM: 9-[1]-[2]-147-[1]-78
[1] [2]
9.1e-08 1.7e-08
MDYQPKNIWVTGCSSGIGKATAKH
+++++++++++++++++++++++
1 TTAGVSRRPGRLAGKAAIVTGAAGGIGRATVEAYLREGASVVAMDLAPRLAATRYEEPGAIPIACDLADRAAIDA
[1]
2.4e-05
MDYQPKNIWVTG
+++ ++++++
151 GSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPVDVTGNNTGYSEPRLAEQVLDEVALGRP
HDE_CANTR
HYDRATASE-DEHYDROGENASE-EPIMERASE (HDE)
LENGTH = 906 COMBINED P-VALUE = 4.40e-09 E-VALUE = 1.5e-07
DIAGRAM: 3-[1]-[2]-290-[1]-[2]-565
[1] [2]
1.4e-08 1.0e-05
MDYQPKNIWVTGCSSGIGKATAKH
++++++++++++++++++ + ++
1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV
[1] [2]
2.3e-07 1.7e-08
MDYQPKNIWVTGCSSGIGKATAKH
++++++++++++ +++++++++
301 TNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQ
3BHD_COMTE
3-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.51)
LENGTH = 253 COMBINED P-VALUE = 5.69e-09 E-VALUE = 1.9e-07
DIAGRAM: 1-[1]-[2]-50-[1]-166
[1] [2]
1.4e-08 3.0e-07
MDYQPKNIWVTGCSSGIGKATAKH
+++++++++++++++++++++++
1 TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ
[1]
7.9e-06
MDYQPKNIWVTG
+++++ +++++
76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAG
BDH_HUMAN
D-BETA-HYDROXYBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.30) (BDH)
(3-HYDROXYBUTYRATE DEHYDROGENASE) (FRAGMENT)
LENGTH = 343 COMBINED P-VALUE = 7.60e-09 E-VALUE = 2.5e-07
DIAGRAM: 50-[1]-[2]-269
[1] [2]
5.6e-08 5.4e-08
MDYQPKNIWVTGCSSGIGKATAKH
++++++++++++++++ +++++++
1 GLRPPPPGRFSRLPGKTLSACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLAKHL
2BHD_STREX
20-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.53)
LENGTH = 255 COMBINED P-VALUE = 1.14e-08 E-VALUE = 3.8e-07
DIAGRAM: 1-[1]-[2]-142-[1]-76
[1] [2]
7.2e-09 1.2e-06
MDYQPKNIWVTGCSSGIGKATAKH
++++++ +++++++++++ + +++
1 MNDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR
[1]
8.5e-06
MDYQPKNIWVTG
++++ +++++
151 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL
BA72_EUBSP
7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (BILE ACID
7-DEHYDROXYLASE) (BILE ACID-INDUCIBLE PROTEIN)
LENGTH = 249 COMBINED P-VALUE = 1.24e-08 E-VALUE = 4.1e-07
DIAGRAM: 1-[1]-[2]-125-[2]-10-[1]-65
[1] [2]
4.3e-05 2.3e-08
MDYQPKNIWVTGCSSGIGKATAKH
+ +++++ +++++ ++++++ ++
1 MNLVQDKVTIITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAA
[2] [1]
2.2e-05 4.2e-07
CSSGIGKATAKH MDYQPKNIWVTG
+ +++++ ++ +++ +++++ +
151 SLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPEIMEGYLKALPMKRMLEPEEIANVY
RIDH_KLEAE
RIBITOL 2-DEHYDROGENASE (EC 1.1.1.56) (RDH)
LENGTH = 249 COMBINED P-VALUE = 1.97e-08 E-VALUE = 6.5e-07
DIAGRAM: 9-[1]-[2]-216
[1] [2]
4.0e-06 4.0e-09
MDYQPKNIWVTGCSSGIGKATAKH
++++++ +++++++++++++++
1 MKHSVSSMNTSLSGKVAAITGAASGIGLECARTLLGAGAKVVLIDREGEKLNKLVAELGENAFALQVDLMQADQV
DHGB_BACME
GLUCOSE 1-DEHYDROGENASE B (EC 1.1.1.47)
LENGTH = 262 COMBINED P-VALUE = 2.04e-08 E-VALUE = 6.7e-07
DIAGRAM: 2-[1]-[2]-149-[1]-75
[1] [2]
5.0e-07 3.0e-07
MDYQPKNIWVTGCSSGIGKATAKH
+++ ++++ +++++ +++++++++
1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVIN
[1]
5.0e-08
MDYQPKNIWVTG
+++++++++++
151 KIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEE
PCR_PEA
no comment
LENGTH = 399 COMBINED P-VALUE = 2.73e-08 E-VALUE = 9e-07
DIAGRAM: 81-[1]-[2]-108-[1]-174
[1] [2]
1.0e-05 1.4e-09
MDYQPKNIWVTGCSSGIGKATAKH
+++++ ++ +++++++++++++++
76 SSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDS
[1]
6.1e-06
MDYQPKNIWVTG
+++ +++ ++ +
151 VRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLIIVG
RFBB_NEIGO
no comment
LENGTH = 346 COMBINED P-VALUE = 4.86e-08 E-VALUE = 1.6e-06
DIAGRAM: 1-[1]-[2]-321
[1] [2]
2.4e-08 8.5e-07
MDYQPKNIWVTGCSSGIGKATAKH
++ ++++++++++++ ++ +++++
1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVF
BPHB_PSEPS
BIPHENYL-CIS-DIOL DEHYDROGENASE (EC 1.3.1.-)
LENGTH = 275 COMBINED P-VALUE = 6.58e-08 E-VALUE = 2.2e-06
DIAGRAM: [1]-[2]-251
[1] [2]
2.1e-07 2.2e-07
MDYQPKNIWVTGCSSGIGKATAKH
+ +++ ++++++++++++++++ +
1 MKLKGEAVLITGGASGLGRALVDRFVAEAKVAVLDKSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVAR
DHB2_HUMAN
no comment
LENGTH = 387 COMBINED P-VALUE = 9.76e-08 E-VALUE = 3.2e-06
DIAGRAM: 77-[1]-[2]-286
[1] [2]
4.6e-07 7.5e-08
MDYQPKNIWVTGCSSGIGKATAKH
+++ ++++++++++++++++++++
76 ELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSPRLSVLQMDITKPVQIKDAYS
NODG_RHIME
NODULATION PROTEIN G (HOST-SPECIFICITY OF NODULATION PROTEIN C)
LENGTH = 245 COMBINED P-VALUE = 1.05e-07 E-VALUE = 3.5e-06
DIAGRAM: 1-[1]-[2]-142-[1]-66
[1] [2]
3.0e-06 3.0e-07
MDYQPKNIWVTGCSSGIGKATAKH
++ + +++++++++ ++ ++++
1 MFELTGRKALVTGASGAIGGAIARVLHAQGAIVGLHGTQIEKLETLATELGDRVKLFPANLANRDEVKALGQRAE
[1]
3.2e-07
MDYQPKNIWVTG
+++++ ++++++
151 NYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLAS
MAS1_AGRRA
no comment
LENGTH = 476 COMBINED P-VALUE = 1.89e-07 E-VALUE = 6.2e-06
DIAGRAM: 252-[2]-36-[1]-164
[2]
2.3e-08
CSSGIGKATAKH
++++++++++++
226 GRVLHFRRGFSHWTVEIHQSPVILVSGSNRGVGKAIAEDLIAHGYRLSLGARKVKDLEVAFGPQDEWLHYARFDA
[1]
1.9e-06
MDYQPKNIWVTG
+++++++++++
301 EDHGTMAAWVTAAVEKFGRIDGLVNNAGYGEPVNLDKHVDYQRFHLQWYINCVAPLRMTELCLPHLYETGSGRIV
DHCA_HUMAN
no comment
LENGTH = 276 COMBINED P-VALUE = 2.04e-07 E-VALUE = 6.7e-06
DIAGRAM: 11-[2]-54-[1]-101-[1]-74
[2]
7.2e-09
CSSGIGKATAKH
++++++++++++
1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF
[1]
2.1e-05
MDYQPKNIWVTG
+++++ ++++
76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCS
[1]
2.7e-05
MDYQPKNIWVTG
+ ++ +++ ++
151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC
DHES_HUMAN
ESTRADIOL 17 BETA-DEHYDROGENASE (EC 1.1.1.62) (20 ALPHA-HYDROXYSTEROID
DEHYDROGENASE) (E2DH) (17-BETA-HSD) (PLACENTAL 17-BETA-HYDROXYSTEROID
DEHYDROGENASE)
LENGTH = 327 COMBINED P-VALUE = 2.88e-07 E-VALUE = 9.5e-06
DIAGRAM: 9-[2]-108-[1]-186
[2]
2.3e-08
CSSGIGKATAKH
++++++++++ +
1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA
[1]
6.5e-06
MDYQPKNIWVTG
++ ++ ++++++
76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP
DHB3_HUMAN
no comment
LENGTH = 310 COMBINED P-VALUE = 5.89e-07 E-VALUE = 1.9e-05
DIAGRAM: 55-[2]-146-[1]-85
[2]
6.4e-08
CSSGIGKATAKH
++ ++++++ +
1 MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYYKVLPKSFLRSMGQWAVITGAGDGIGKAYSFELAKRGLNV
[1]
5.7e-06
MDYQPKNIWVTG
++++ + +++
151 QSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQV
HMTR_LEIMA
no comment
LENGTH = 287 COMBINED P-VALUE = 8.19e-07 E-VALUE = 2.7e-05
DIAGRAM: 24-[2]-172-[1]-67
[2]
7.3e-06
CSSGIGKATAKH
+ + +++++++
1 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS
[1]
8.2e-08
MDYQPKNIWVTG
+++++ ++++++
151 PYFLIKAFAHRSRHPSQASRTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL
ADH_DROME
ALCOHOL DEHYDROGENASE (EC 1.1.1.1)
LENGTH = 255 COMBINED P-VALUE = 1.89e-06 E-VALUE = 6.2e-05
DIAGRAM: 13-[2]-217-[1]-1
[2]
2.2e-07
CSSGIGKATAKH
+ +++++ + ++
1 SFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKL
[1]
8.5e-06
MDYQPKNIWVTG
+ +++++++ ++
226 IELNQNGAIWKLDLGTLEAIQWTKHWDSGI
YURA_MYXXA
no comment
LENGTH = 258 COMBINED P-VALUE = 3.91e-06 E-VALUE = 0.00013
DIAGRAM: 94-[2]-69-[1]-71
[2]
4.8e-05
CSSGIGKATAKH
++ +++ +
76 TLERIRALDAEAGGLDLVVANAGVGGTTNAKRLPWERVRGIIDTNVTGAAATLSAVLPQMVERKRGHLVGVSSLA
[1]
8.2e-08
MDYQPKNIWVTG
+++++++++++
151 GFRGLPATRYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSELTATNNFPMPFLMETHDAVELMGKGIVRG
LIGD_PSEPA
C ALPHA-DEHYDROGENASE (EC -.-.-.-)
LENGTH = 305 COMBINED P-VALUE = 4.10e-06 E-VALUE = 0.00014
DIAGRAM: 1-[1]-[2]-280
[1] [2]
8.8e-07 3.3e-06
MDYQPKNIWVTGCSSGIGKATAKH
++++++++ +++++++ ++ ++
1 MKDFQDQVAFITGGASGAGFGQAKVFGQAGAKIVVADVRAEAVEKAVAELEGLGITAHGIVLDIMDREAYARAAD
FABI_ECOLI
no comment
LENGTH = 262 COMBINED P-VALUE = 5.35e-06 E-VALUE = 0.00018
DIAGRAM: 1-[1]-161-[1]-76
[1]
4.1e-08
MDYQPKNIWVTG
++++++++++
1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF
[1]
6.1e-05
MDYQPKNIWVTG
+ ++ +++++
151 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV
GUTD_ECOLI
SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE
DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE)
LENGTH = 259 COMBINED P-VALUE = 9.46e-05 E-VALUE = 0.0031
DIAGRAM: 147-[2]-10-[1]-78
[2]
2.3
CSS
+++
76 DEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH
[1]
e-05 5.3e-06
GIGKATAKH MDYQPKNIWVTG
+++ ++ +++++++++++
151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGC
CSGA_MYXXA
no comment
LENGTH = 166 COMBINED P-VALUE = 2.25e-04 E-VALUE = 0.0074
DIAGRAM: 12-[1]-53-[2]-77
[1]
6.8e-05
MDYQPKNIWVTG
++ ++ +++
1 MRAFATNVCTGPVDVLINNAGVSGLWCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGALRRVAHVTSRMG
[2]
1.2e-05
CSSGIGKATAKH
++ + +++++
76 SLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWVQTDMGGPDATLPAPDSVRGMLRVIDGLNP
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mast -oc results/mast21 -nostatus meme/meme.adh.de.oops.html common/adh.s
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