File: exn_22_m_coding2genome_vulgar.exn

package info (click to toggle)
python-biopython 1.85%2Bdfsg-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 126,380 kB
  • sloc: xml: 1,047,995; python: 332,722; ansic: 16,944; sql: 1,208; makefile: 142; sh: 81
file content (6 lines) | stat: -rw-r--r-- 593 bytes parent folder | download | duplicates (3) 
1
2
3
4
5
6
 
Command line: [exonerate -m coding2genome ../scer_cad1.fa /media/Waterloo/Downloads/genomes/scer_s288c/scer_s288c.fa --bestn 3 --showalignment no --showcigar no --showvulgar yes]
Hostname: [blackbriar]
vulgar: gi|296143771|ref|NM_001180731.1| 1228 1 - gi|330443520|ref|NC_001136.10| 1318047 1319274 + 2151 C 1227 1227
vulgar: gi|296143771|ref|NM_001180731.1| 0 1230 + gi|330443520|ref|NC_001136.10| 1319275 1318045 - 2106 C 1230 1230
vulgar: gi|296143771|ref|NM_001180731.1| 1065 1224 + gi|330443688|ref|NC_001145.3| 255638 255794 + 116 C 105 105 G 3 0 C 51 51
-- completed exonerate analysis