File: cell_lines_2.txt

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ID   XP3OS
AC   CVCL_3245
AS   CVCL_F511
SY   Xeroderma Pigmentosum 3 OSaka; GM04314; GM04314B; GM4314
DR   CLO; CLO_0019557
DR   Coriell; GM04314
DR   GEO; GSM1338611
DR   JCRB; JCRB0303
DR   JCRB; KURB1002
DR   JCRB; KURB1003
DR   JCRB; KURB1004
DR   Wikidata; Q54994928
RX   CelloPub=CLPUB00447;
RX   PubMed=832273;
RX   PubMed=1372102;
RX   PubMed=1702221;
RX   PubMed=2570806;
RX   PubMed=7000335;
RX   PubMed=7830260;
RX   PubMed=9671271;
RX   PubMed=27197874;
CC   Population: Japanese.
CC   Sequence variation: Mutation; HGNC; 12814; XPA; Simple; c.390-1G>C (IVS3-1G>C); ClinVar=VCV000264684; Zygosity=Homozygous; Note=Splice acceptor mutation (PubMed=1702221; PubMed=9671271; PubMed=27197874).
CC   Omics: Deep exome analysis.
CC   Misspelling: XP30S; Note=Occasionally.
CC   Derived from site: In situ; Skin; UBERON=UBERON_0002097.
CC   Cell type: Fibroblast of skin; CL=CL_0002620.
ST   Source(s): JCRB; PubMed=27197874
ST   Amelogenin: X
ST   CSF1PO: 10,11
ST   D13S317: 9,11
ST   D16S539: 9,12
ST   D18S51: 13
ST   D21S11: 29,30
ST   D3S1358: 15,16
ST   D5S818: 10,11
ST   D7S820: 11,12
ST   D8S1179: 13,15
ST   FGA: 22,23
ST   Penta D: 9
ST   Penta E: 14,17
ST   TH01: 7
ST   TPOX: 8,11
ST   vWA: 14,16
DI   NCIt; C3965; Xeroderma pigmentosum, complementation group A
DI   ORDO; Orphanet_910; Xeroderma pigmentosum
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
SX   Female
AG   5Y
CA   Finite cell line
DT   Created: 04-04-12; Last updated: 29-06-23; Version: 20
//
ID   1-5c-4
AC   CVCL_2260
SY   Clone 1-5c-4; Clone 1-5c-4 WKD of Chang Conjunctiva; Wong-Kilbourne derivative of Chang conjunctiva; ChWK
DR   CLO; CLO_0002500
DR   CLO; CLO_0002501
DR   CLDB; cl793
DR   CLDB; cl794
DR   CLDB; cl795
DR   ATCC; CCL-20.2
DR   BioSample; SAMN03151673
DR   ECACC; 88021103
DR   IZSLER; BS CL 93
DR   KCLB; 10020.2
DR   Wikidata; Q54399838
RX   DOI=10.1007/BF02618370;
RX   PubMed=566722;
RX   PubMed=19630270;
RX   PubMed=20143388;
WW   https://iclac.org/wp-content/uploads/Cross-Contaminations_v12_distribution.xlsx
CC   Problematic cell line: Contaminated. Shown to be a HeLa derivative (PubMed=566722; PubMed=20143388). Originally thought to originate from the conjunctiva of a child.
CC   Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00298.
CC   Population: African American.
CC   Transformant: NCBI_TaxID; 333761; Human papillomavirus type 18 (HPV18).
CC   Omics: Transcriptome analysis by microarray.
CC   Derived from site: In situ; Uterus, cervix; UBERON=UBERON_0000002.
ST   Source(s): ATCC; KCLB
ST   Amelogenin: X
ST   CSF1PO: 9,10
ST   D13S317: 12,13.3
ST   D16S539: 9,10
ST   D3S1358: 15,18
ST   D5S818: 11,12
ST   D7S820: 8,12
ST   FGA: 18,21
ST   TH01: 7
ST   TPOX: 8,12
ST   vWA: 16,18
DI   NCIt; C27677; Human papillomavirus-related cervical adenocarcinoma
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
HI   CVCL_0030 ! HeLa
SX   Female
AG   30Y6M
CA   Cancer cell line
DT   Created: 04-04-12; Last updated: 05-10-23; Version: 25
//