File: exn_22_m_affine_local_vulgar.exn

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Command line: [exonerate -m affine:local ../scer_cad1.fa /media/Waterloo/Downloads/genomes/scer_s288c/scer_s288c.fa --bestn 3 --showalignment no --showcigar no --showvulgar yes]
Hostname: [blackbriar]
vulgar: gi|296143771|ref|NM_001180731.1| 0 1230 + gi|330443520|ref|NC_001136.10| 1319275 1318045 - 6150 M 1230 1230
vulgar: gi|296143771|ref|NM_001180731.1| 83 552 + gi|330443688|ref|NC_001145.3| 253990 254474 + 359 M 34 34 G 0 1 M 6 6 G 0 2 M 101 101 G 0 2 M 6 6 G 2 0 M 3 3 G 1 0 M 12 12 G 0 1 M 9 9 G 1 0 M 26 26 G 0 1 M 34 34 G 0 5 M 13 13 G 0 2 M 7 7 G 0 1 M 10 10 G 0 1 M 14 14 G 0 3 M 9 9 G 0 1 M 20 20 G 0 2 M 2 2 G 0 1 M 7 7 G 0 1 M 2 2 G 0 1 M 6 6 G 0 1 M 3 3 G 1 0 M 2 2 G 3 0 M 10 10 G 0 1 M 2 2 G 0 3 M 9 9 G 2 0 M 9 9 G 3 0 M 7 7 G 0 1 M 6 6 G 2 0 M 8 8 G 0 1 M 32 32 G 2 0 M 9 9 G 2 0 M 9 9 G 0 2 M 23 23
vulgar: gi|296143771|ref|NM_001180731.1| 60 517 + gi|330443715|ref|NC_001146.8| 454073 454531 + 219 M 14 14 G 1 0 M 7 7 G 1 0 M 3 3 G 1 0 M 12 12 G 0 1 M 23 23 G 0 1 M 16 16 G 2 0 M 17 17 G 0 2 M 6 6 G 0 1 M 7 7 G 0 1 M 8 8 G 1 0 M 12 12 G 0 1 M 3 3 G 0 1 M 14 14 G 0 1 M 10 10 G 0 1 M 20 20 G 0 1 M 19 19 G 0 2 M 9 9 G 5 0 M 8 8 G 1 0 M 41 41 G 3 0 M 42 42 G 0 1 M 8 8 G 0 3 M 1 1 G 0 1 M 26 26 G 2 0 M 11 11 G 3 0 M 12 12 G 0 1 M 18 18 G 0 1 M 18 18 G 0 1 M 14 14 G 0 1 M 30 30 G 1 0 M 7 7
-- completed exonerate analysis