File: exn_22_m_ner_vulgar.exn

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Command line: [exonerate -m ner ../scer_cad1.fa /media/Waterloo/Downloads/genomes/scer_s288c/scer_s288c.fa --bestn 3 --showalignment no --showcigar no --showvulgar yes]
Hostname: [blackbriar]
vulgar: gi|296143771|ref|NM_001180731.1| 0 1230 + gi|330443520|ref|NC_001136.10| 1319275 1318045 - 6150 M 1230 1230
vulgar: gi|296143771|ref|NM_001180731.1| 110 1230 + gi|330443681|ref|NC_001144.5| 297910 318994 + 502 M 7 7 N 31 29 M 11 11 N 10 13 M 13 13 N 2 9 M 5 5 G 1 0 M 7 7 N 30 15 M 4 4 G 0 1 M 7 7 G 0 1 M 6 6 N 11 11 M 6 6 N 5 10 M 18 18 N 12 12 M 12 12 N 1 10 M 6 6 G 1 0 M 10 10 G 0 2 M 4 4 G 0 1 M 9 9 N 369 20288 M 8 8 N 12 9 M 6 6 N 10 16 M 12 12 G 2 0 M 9 9 N 11 6 M 20 20 G 1 0 M 5 5 N 12 37 M 5 5 N 11 41 M 13 13 N 44 6 M 7 7 N 19 2 M 7 7 G 1 0 M 8 8 N 9 5 M 6 6 N 7 16 M 6 6 N 1 4 M 8 8 N 11 9 M 5 5 G 1 0 M 8 8 N 13 4 M 9 9 N 1 8 M 6 6 N 2 7 M 11 11 G 0 1 M 5 5 N 7 15 M 6 6 G 1 0 M 15 15 G 1 0 M 13 13 N 9 13 M 5 5 N 2 12 M 19 19 N 3 19 M 4 4 G 1 0 M 4 4 N 3 16 M 6 6 N 17 5 M 9 9 N 2 11 M 10 10 N 10 5 M 13 13 N 10 2 M 20 20
vulgar: gi|296143771|ref|NM_001180731.1| 509 1192 + gi|330443520|ref|NC_001136.10| 183946 184603 + 440 M 5 5 N 23 26 M 10 10 N 20 15 M 28 28 N 12 14 M 10 10 N 19 12 M 14 14 N 17 12 M 15 15 N 1 4 M 7 7 G 0 1 M 6 6 G 0 1 M 6 6 G 1 0 M 15 15 N 19 22 M 9 9 N 2 12 M 4 4 G 0 2 M 4 4 G 1 0 M 9 9 N 11 2 M 3 3 G 1 0 M 10 10 N 6 15 M 12 12 N 6 20 M 9 9 G 1 0 M 8 8 N 10 11 M 5 5 N 13 11 M 21 21 N 20 10 M 18 18 N 7 2 M 11 11 N 19 16 M 6 6 G 1 0 M 11 11 G 0 1 M 4 4 G 0 2 M 11 11 G 1 0 M 4 4 N 15 7 M 10 10 N 2 14 M 9 9 N 19 13 M 10 10 G 1 0 M 18 18 N 20 2 M 9 9 N 14 18 M 10 10 G 0 2 M 8 8 N 7 3 M 7 7 N 13 6 M 25 25
-- completed exonerate analysis