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# STOCKHOLM 1.0
#=GF AC RF04178
#=GF ID BTnc005
#=GF DE Bacteroides sRNA BTnc005
#=GF AU Prezza, G
#=GF AU Ryan, D
#=GF AU Mädler, G
#=GF AU Barquist, L; 0000-0003-4732-2667
#=GF AU Westermann, A
#=GF SE Published; PMID:32678091;
#=GF SS Published; PMID:32678091;
#=GF GA 174.80
#=GF TC 179.30
#=GF NC 174.30
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 742849.287494 CM SEQDB
#=GF DR SO; 0000655; ncRNA;
#=GF RN [1]
#=GF RM 32678091
#=GF RT A high-resolution transcriptome map identifies small RNA regulation of
#=GF RT metabolism in the gut microbe Bacteroides thetaiotaomicron.
#=GF RA Ryan D, Jenniches L, Reichardt S, Barquist L, Westermann AJ
#=GF RL Nat Commun. 2020;11:3557.
#=GF CC An uncharacterized small RNA discovered in Bacteroides thetaiotaomicron
#=GF CC [1]
#=GF WK Bacteroides_thetaiotaomicron_sRNA
#=GF SQ 3
AE015928.1/72774-72978 GUAAGUAAAAGUGUAACAGGAAGAAAGUUGCAGCAUAUAUGCGGUGAAUUAUGCGGUGUCAUAGGAAUUGAGGAUUUAUGUAAGAUGCUGAUAAUGAGUAAGGAACCUUAAAGUUAAUCGUUCCCUGUCUCUCCGCAGAACCUACUGGACAAAACAGGACAGUAAGUGGACAAAAACCUACAAAUCAGC-GAUUUGUAGGUUUUUU
CP000139.1/2819055-2819247 AAAAGUAAGAGUGUAACAGGAAGAAAGUUGCAGCAUAUACGCGGUGAAUUAUUCGGUGUCAUAGGAGUAGAGUCUUUUGGUAAGAUGCUGAUAAUGAGUAGGGGAGAUGAAAGUUAAUCGUUCCCUGUCUCUCCGCUGG---------AAAGAAUUGCAAAACAA--AGA-AAAUCCCUGUAAAUUAAU-ACUUUACGGGGAUUUU
FP929033.1/4930704-4930908 GUAAGUAAAAGUGUAACAGGAAGAAAGUUGCAGCAUAUAUGCGGUGAAUUAUGCGGUGUCAUAGGAAUUGAGGAUUUAUGUAAGAUGCUGAUAAUGAGUAAGGAACCUUAAAGUUAAUCGUUCCCUGUCUCUCCGCUGAACUAUCCGGACAAAACCGGGCAAUGAACAGUCAAA-UCCCACAAAUUCAAUGAUUUGUGGGACUUUU
#=GC SS_cons :::::::::::<<<<<<_________>>>>>>,,,,,,,,((((,,,<<<<<-<<<<<<<----<<<_______>>>------>>>>>>>>>>>><<<<<-<<<<_______________>>>>->>->>>,))))---------------------------------------<<<<<<<<<<<____>>>>>>>>>>>:::::
#=GC RF guAAGUAAaAGuGuaaCAGGAAGAAAGuugCaGCAUAUAuGCGGUGAauuaugCgGuguCAUAGgaaUuGAGgauuuauGUAAGaugCuGauaauGaGuaaGGaaccUuAAAGUUAAUCGuuCCCugUCuCUCCGCuGaACuaaCuGGAcAaAAcuGgacAauaAauaGaCAAAacCCcgcaaaucaau.gauuugcgGGguUUUU
//
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