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##maf version=1
a score=-247111.0
s mm10.chr12 56694986 40 + 120129022 CTCTTTAG---TCTGG--------TTTTTTAATTTTTTTTTCC-T------CA-----CTGCA
s hetGla2.JH602151 6912245 40 - 7060556 AATTTCAGCCCCCCCG--------ATGCCTAGGTTTCC---CC-G------CA-----CTGGA
i hetGla2.JH602151 C 0 C 0
s micMur1.scaffold_1897 109315 37 + 248211 CGCTTCAG--CTGCAC--------GTGTTTAAATTCCC---GGCA------CA-----TGG--
i micMur1.scaffold_1897 I 1 C 0
s tupBel1.scaffold_149545.1-136892 2307 42 + 136892 AGCTTTCG--CTGCGT--------GTGGTTACTTTCTC---CGCA------CACCGCGCAG--
i tupBel1.scaffold_149545.1-136892 I 1 C 0
s pteVam1.scaffold_182 42258 37 + 455609 AGCTTTAG--CTGCAA--------GTGGTTACATTCTC---TGCA------CA-----CCT--
i pteVam1.scaffold_182 I 1 I 2
s eriEur1.scaffold_370206 11243 36 + 65867 ACTTTAAG--TAACTTAAAGAAACTCGGCTACACACTC-------------------------
i eriEur1.scaffold_370206 I 1 I 2
s sorAra1.scaffold_233549 581 38 + 65803 GCTTTTAG--CCACTCAAGG----TCGGTTATGTCCAC---TGCA------CA----------
i sorAra1.scaffold_233549 I 1 I 2
s loxAfr3.scaffold_9 12283164 24 + 83325590 ------------GCTT--------GTAGTTAAGTTCTC---GGTA------CA----------
i loxAfr3.scaffold_9 C 0 C 0
e bosTau7.chr21 47705583 182 + 69078422 I
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