package info (click to toggle)
python-cai 1.0.4-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 43,276 kB
  • sloc: python: 713; makefile: 24

Folder: benchmark

d .. (parent)
d d rwxr-xr-x 4,096 Genes for reference
- - rw-r--r-- 1,467 24%20genes
- - rw-r--r-- 63,173 GAL4.png
- - rw-r--r-- 6,632 GAL4_PPR1_GDP1.fasta
- - rw-r--r-- 111,384 GAL4b.png
- - rw-r--r-- 610,536 PGK1.pdf
- - rw-r--r-- 112,986 PPR1.png
- - rw-r--r-- 931 RSCU_sharp.pickle
- - rw-r--r-- 931 RSCUe.pickle
- - rw-r--r-- 931 RSCUy.pickle
- - rw-r--r-- 1,325 S288C_YCR012W_PGK1_genomic.fsa
- - rw-r--r-- 1,069 S288C_YGR192C_TDH3_genomic.fsa
- - rw-r--r-- 2,814 S288C_YLR014C_PPR1_genomic.fsa
- - rw-r--r-- 2,742 S288C_YPL248C_GAL4_genomic.fsa
- - rw-r--r-- 1,453 S288C_YPR080W_TEF1_genomic.fsa
- - rw-r--r-- 272,306 Screenshot%20from%202021-03-17%2011-39-37.png
- - rw-r--r-- 76,749 Screenshot%20from%202021-03-17%2011-54-42.png
- - rw-r--r-- 610,561 TDH3.pdf
- - rw-r--r-- 116,232 TDH3.png
- - rw-r--r-- 610,497 TEF1.pdf
- - rwxr-xr-x 1,454 TmFAAH.ipynb
- - rw-r--r-- 3,987 benchmark.ipynb
- - rw-r--r-- 2,516 cai2.py
- - rw-r--r-- 273,088 ecoli.heg.fasta
- - rw-r--r-- 4,719 gene_tables
- - rwxr-xr-x 4,520 pygenome.ipynb
- - rw-r--r-- 28,887 sharp_CAI.ipynb
- - rw-r--r-- 50,079 sharp_CAI2.ipynb
- - rw-r--r-- 276,217 sharp_table_1.png
- - rw-r--r-- 85,533 sharp_table_2.png
- - rw-r--r-- 325,077 table1a.png
- - rw-r--r-- 286,613 table1b.png
- - rw-r--r-- 100,059 table1b2.png
- - rw-r--r-- 86,205 table1c.png
- - rw-r--r-- 3,055,491 test.fasta