File: test_linkage.py

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python-cluster 1.4.1.post3-1
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import unittest

from cluster.linkage import single, complete, uclus, average


class LinkageMethods(unittest.TestCase):

    def setUp(self):
        self.set_a = [1, 2, 3, 4]
        self.set_b = [10, 11, 12, 13, 14, 15, 100]
        self.dist = lambda x, y: abs(x-y)  # NOQA

    def test_single_distance(self):
        result = single(self.set_a, self.set_b, self.dist)
        expected = 6
        self.assertEqual(result, expected)

    def test_complete_distance(self):
        result = complete(self.set_a, self.set_b, self.dist)
        expected = 99
        self.assertEqual(result, expected)

    def test_uclus_distance(self):
        result = uclus(self.set_a, self.set_b, self.dist)
        expected = 10.5
        self.assertEqual(result, expected)

    def test_average_distance(self):
        result = average(self.set_a, self.set_b, self.dist)
        expected = 22.5
        self.assertEqual(result, expected)

if __name__ == '__main__':

    import logging

    suite = unittest.TestSuite((
        unittest.makeSuite(LinkageMethods),
    ))

    logging.basicConfig(level=logging.DEBUG)
    unittest.TextTestRunner(verbosity=2).run(suite)