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Source: python-cobra
Section: python
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>
Build-Depends:
debhelper (>= 9),
dh-python,
libglpk-dev,
# Python2
python-all,
python-all-dev,
python-setuptools,
python-six,
cython,
# Python3
python3-all,
python3-all-dev,
python3-setuptools,
python3-six,
cython3,
# Test-Depends:
python-pytest,
python3-pytest,
python-jsonschema (>> 2.5.0),
python-numpy,
python-scipy,
python3-jsonschema (>> 2.5.0),
python3-numpy,
python3-scipy,
Standards-Version: 3.9.8
Homepage: http://opencobra.github.io/cobrapy/
Vcs-Git: https://anonscm.debian.org/git/debian-med/python-cobra.git
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python-cobra.git
Package: python-cobra
Architecture: any
Depends:
${shlibs:Depends},
${misc:Depends},
${python:Depends},
python-cobra-data (= ${source:Version}),
Recommends:
python-numpy,
python-scipy,
libsbml5-python,
python-pandas,
Suggests:
python-matplotlib,
qsopt-ex,
Description: constraint-based modeling of biological networks (Python 2)
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
used for genome-scale modeling of metabolic networks in both prokaryotes
and eukaryotes. COBRApy is a constraint-based modeling package that is
designed to accommodate the biological complexity of the next generation
of COBRA models and provides access to commonly used COBRA methods, such
as flux balance analysis, flux variability analysis, and gene deletion
analyses.
.
This package provides the Python 2 module.
Package: python3-cobra
Architecture: any
Depends:
${shlibs:Depends},
${misc:Depends},
${python3:Depends},
python-cobra-data (= ${source:Version}),
Recommends:
python3-numpy,
python3-scipy,
python3-pandas,
Suggests:
python3-matplotlib,
qsopt-ex,
Description: constraint-based modeling of biological networks (Python 3)
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
used for genome-scale modeling of metabolic networks in both prokaryotes
and eukaryotes. COBRApy is a constraint-based modeling package that is
designed to accommodate the biological complexity of the next generation
of COBRA models and provides access to commonly used COBRA methods, such
as flux balance analysis, flux variability analysis, and gene deletion
analyses.
.
This package provides the Python 3 module.
Package: python-cobra-data
Architecture: all
Depends: ${misc:Depends}
Description: constraint-based modeling of biological networks (data)
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
used for genome-scale modeling of metabolic networks in both prokaryotes
and eukaryotes. COBRApy is a constraint-based modeling package that is
designed to accommodate the biological complexity of the next generation
of COBRA models and provides access to commonly used COBRA methods, such
as flux balance analysis, flux variability analysis, and gene deletion
analyses.
.
This package provides required and sample data files.
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