File: dayhoff.dat

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 27                                        
 98  32                                        
120   0 905                                    
 36  23   0   0                                    
 89 246 103 134   0                                
198   1 148 1153  0 716                                
240   9 139 125  11  28  81                            
 23 240 535  86  28 606  43  10                            
 65  64  77  24  44  18  61   0   7                        
 41  15  34   0   0  73  11   7  44 257                        
 26 464 318  71   0 153  83  27  26  46  18                    
 72  90   1   0   0 114  30  17   0 336 527 243                    
 18  14  14   0   0   0   0  15  48 196 157   0  92                
250 103  42  13  19 153  51  34  94  12  32  33  17  11                
409 154 495  95 161  56  79 234  35  24  17  96  62  46 245            
371  26 229  66  16  53  34  30  22 192  33 136 104  13  78 550            
  0 201  23   0   0   0   0   0  27   0  46   0   0  76   0  75   0        
 24   8  95   0  96   0  22   0 127  37  28  13   0 698   0  34  42  61        
208  24  15  18  49  35  37  54  44 889 175  10 258  12  48  30 157   0  28 

0.087127 0.040904 0.040432 0.046872 0.033474 0.038255 0.049530
0.088612 0.033618 0.036886 0.085357 0.080482 0.014753 0.039772
0.050680 0.069577 0.058542 0.010494 0.029916 0.064718

Ala Arg Asn Asp Cys Gln Glu Gly His Ile Leu Lys Met Phe Pro Ser Thr Trp Tyr Val

S_ij = S_ji and PI_i for the Dayhoff model, with the rate Q_ij=S_ij*PI_j
The rest of the file is not used.
Prepared by Z. Yang, March 1995.

From the PAML distribution.