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.. jupyter-execute::
:hide-code:
import set_working_directory
Circular Dendrogram Style
=========================
I modify values for the ``scale_bar`` placement and for ``label_pad``. The latter controls the spacing between the tip ends and the label text.
.. jupyter-execute::
from cogent3.app import io
reader = io.load_json()
ens_tree = reader("data/GN-tree.json")
fig = ens_tree.get_figure("circular", width=600, height=600)
fig.scale_bar = "top right"
fig.label_pad = 0.1
fig.show()
Colouring a set of edges
------------------------
.. jupyter-execute::
fig.style_edges(
"AfricanEl",
tip2="Manatee",
legendgroup="Afrotheria",
line=dict(color="magenta", width=2),
)
fig.show(width=650, height=600)
With Contemporaneous Tips
-------------------------
.. jupyter-execute::
fig.contemporaneous = True
fig.label_pad = 0.3
fig.show(width=650, height=600)
.. jupyter-execute::
:hide-code:
outpath = set_working_directory.get_thumbnail_dir() / "plot_tree-circular.png"
fig.write(outpath)
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