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Source: python-cogent
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>,
Andreas Tille <tille@debian.org>,
Section: python
Testsuite: autopkgtest-pkg-python
Priority: optional
Build-Depends: architecture-is-64-bit,
architecture-is-little-endian,
cython3,
debhelper-compat (= 13),
dh-sequence-python3,
flit,
libjs-requirejs,
pandoc,
pybuild-plugin-pyproject,
python3-all-dev,
python3-chardet,
python3-isort,
python3-jupyter-sphinx-theme,
python3-jupyterlab-server,
python3-matplotlib,
python3-nbsphinx,
python3-numba,
python3-numpy,
python3-numpydoc,
python3-pandas,
python3-plotly <!nocheck>,
python3-pydata-sphinx-theme,
python3-pytest <!nocheck>,
python3-pytest-cov <!nocheck>,
python3-pytest-xdist <!nocheck>,
python3-scipy,
python3-scitrack,
python3-sphinx,
python3-sphinx-bootstrap-theme,
python3-sphinx-design,
python3-sphinx-gallery,
python3-sphinxcontrib.bibtex,
python3-stevedore,
python3-tinydb,
python3-tqdm,
python3-typing-extensions <!nocheck>,
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/python-cogent
Vcs-Git: https://salsa.debian.org/med-team/python-cogent.git
Homepage: https://github.com/cogent3/cogent3
Rules-Requires-Root: no
Package: python3-cogent3
Architecture: any
Depends: python3-matplotlib,
python3-numba,
python3-pandas,
python3-plotly,
python3-scitrack,
python3-tinydb,
python3-tqdm,
${misc:Depends},
${python3:Depends},
${shlibs:Depends},
Recommends: dialign,
ncbi-blast+-legacy,
Suggests: python-cogent-doc,
Provides: python-cogent,
Description: framework for genomic biology
PyCogent is a software library for genomic biology. It is a fully
integrated and thoroughly tested framework for:
* controlling third-party applications,
* devising workflows; querying databases,
* conducting novel probabilistic analyses of biological sequence
evolution, and
* generating publication quality graphics.
It is distinguished by many unique built-in capabilities (such as true codon
alignment) and the frequent addition of entirely new methods for the analysis
of genomic data.
Package: python-cogent-doc
Architecture: all
Multi-Arch: foreign
Section: doc
Depends: libjs-jquery,
libjs-requirejs,
libjs-underscore,
${misc:Depends},
${sphinxdoc:Depends},
Suggests: python3-cogent3 (= ${binary:Version}),
Description: docs for python3-cogent3
PyCogent is a software library for genomic biology.
.
It is distinguished by many unique built-in capabilities (such as true codon
alignment) and the frequent addition of entirely new methods for the analysis
of genomic data.
.
This package contains documentation and examples.
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