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.. cooler documentation master file, created by
sphinx-quickstart on Sun Jan 17 11:53:23 2016.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
Cooler
======
Cooler is a Python support library for .cool/.mcool files: an efficient storage format for high resolution genomic interaction matrices.
The cooler package aims to facilitate:
* Creation, aggregation and manipulation of genomically-labeled sparse matrices.
* Querying: sequential and range query patterns and tabular and sparse/dense array retrieval.
* Scalable out-of-core operations on the data.
* Data export and visualization.
Follow cooler development on `GitHub <https://github.com/open2c/cooler>`_.
Contents:
.. toctree::
:maxdepth: 2
quickstart
datamodel
concepts
schema
api
cli
releasenotes
* :ref:`genindex`
* :ref:`Glossary`
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