.. _cmd:

===========================
Coverage command line usage
===========================

:history: 20090524T134300, brand new docs.
:history: 20090613T164000, final touches for 3.0
:history: 20090913T084400, new command line syntax
:history: 20091004T170700, changes for 3.1
:history: 20091127T200700, changes for 3.2
:history: 20100223T200600, changes for 3.3
:history: 20100725T211700, updated for 3.4
:history: 20110827T212500, updated for 3.5.1, combining aliases
:history: 20120119T075600, Added some clarification from George Paci
:history: 20120504T091800, Added info about execution warnings, and 3.5.2 stuff.
:history: 20120807T211600, Clarified the combine rules.
:history: 20121003T074600, Fixed an option reference, https://bitbucket.org/ned/coveragepy/issue/200/documentation-mentions-output-xml-instead
:history: 20121117T091000, Added command aliases.

.. highlight:: console


When you install coverage.py, a command-line script simply called ``coverage``
is placed in your Python scripts directory.  To help with multi-version
installs, it will also create either a ``coverage2`` or ``coverage3`` alias,
and a ``coverage-X.Y`` alias, depending on the version of Python you're using.
For example, when installing on Python 2.7, you will be able to use
``coverage``, ``coverage2``, or ``coverage-2.7`` on the command line.

Coverage has a number of commands which determine the action performed:

* **run** -- Run a Python program and collect execution data.

* **report** -- Report coverage results.

* **html** -- Produce annotated HTML listings with coverage results.

* **xml** -- Produce an XML report with coverage results.

* **annotate** -- Annotate source files with coverage results.

* **erase** -- Erase previously collected coverage data.

* **combine** -- Combine together a number of data files.

* **debug** -- Get diagnostic information.

Help is available with the **help** command, or with the ``--help`` switch on
any other command::

    $ coverage help
    $ coverage help run
    $ coverage run --help

Version information for coverage.py can be displayed with
``coverage --version``.

Any command can use a configuration file by specifying it with the
``--rcfile=FILE`` command-line switch.  Any option you can set on the command
line can also be set in the configuration file.  This can be a better way to
control coverage.py since the configuration file can be checked into source
control, and can provide options that other invocation techniques (like test
runner plugins) may not offer. See :ref:`config` for more details.


.. _cmd_execution:

Execution
---------

You collect execution data by running your Python program with the **run**
command::

    $ coverage run my_program.py arg1 arg2
    blah blah ..your program's output.. blah blah

Your program runs just as if it had been invoked with the Python command line.
Arguments after your file name are passed to your program as usual in
``sys.argv``.  Rather than providing a filename, you can use the ``-m`` switch
and specify an importable module name instead, just as you can with the
Python ``-m`` switch::

    $ coverage run -m packagename.modulename arg1 arg2
    blah blah ..your program's output.. blah blah

If you want :ref:`branch coverage <branch>` measurement, use the ``--branch``
flag.  Otherwise only statement coverage is measured.

You can specify the code to measure with the ``--source``, ``--include``, and
``--omit`` switches.  See :ref:`Specifying source files <source_execution>` for
details of their interpretation.  Remember to put options for run after "run",
but before the program invocation::

    $ coverage run --source=dir1,dir2 my_program.py arg1 arg2
    $ coverage run --source=dir1,dir2 -m packagename.modulename arg1 arg2

By default, coverage does not measure code installed with the Python
interpreter, for example, the standard library. If you want to measure that
code as well as your own, add the ``-L`` flag.

If your coverage results seem to be overlooking code that you know has been
executed, try running coverage again with the ``--timid`` flag.  This uses a
simpler but slower trace method.  Projects that use DecoratorTools, including
TurboGears, will need to use ``--timid`` to get correct results.  This option
can also be enabled by setting the environment variable COVERAGE_OPTIONS to
``--timid``.

If you are measuring coverage in a multi-process program, or across a number of
machines, you'll want the ``--parallel-mode`` switch to keep the data separate
during measurement.  See :ref:`cmd_combining` below.

During execution, coverage.py may warn you about conditions it detects that
could affect the measurement process.  The possible warnings include:

* "Trace function changed, measurement is likely wrong: XXX"

  Coverage measurement depends on a Python setting called the trace function.
  Other Python code in your product might change that function, which will
  disrupt coverage.py's measurement.  This warning indicate that has happened.
  The XXX in the message is the new trace function value, which might provide
  a clue to the cause.

* "Module XXX has no Python source"

  You asked coverage.py to measure module XXX, but once it was imported, it
  turned out not to have a corresponding .py file.  Without a .py file,
  coverage.py can't report on missing lines.

* "Module XXX was never imported"

  You asked coverage.py to measure module XXX, but it was never imported by
  your program.

* "No data was collected"

  Coverage.py ran your program, but didn't measure any lines as executed.
  This could be because you asked to measure only modules that never ran,
  or for other reasons.

.. _cmd_run_debug:

The ``--debug`` option instructs coverage to log internal details of its
operation, to help with diagnosing problems.  It takes a comma-separated list
of options, each indicating a facet of operation to log to stderr:

* ``trace``: print every decision about whether to trace a file or not. For
  files not being traced, the reason is also given.

* ``config``: before starting, dump all the :ref:`configuration <config>`
  values.

* ``sys``: before starting, dump all the system and environment information,
  as with :ref:`coverage debug sys <cmd_debug>`.

* ``dataio``: log when reading or writing any data file.

* ``pid``: annotate all debug output with the process id.


.. _cmd_datafile:

Data file
---------

Coverage collects execution data in a file called ".coverage".  If need be, you
can set a new file name with the COVERAGE_FILE environment variable.

By default,each run of your program starts with an empty data set. If you need
to run your program multiple times to get complete data (for example, because
you need to supply disjoint options), you can accumulate data across runs with
the ``-a`` flag on the **run** command.

To erase the collected data, use the **erase** command::

    $ coverage erase


.. _cmd_combining:

Combining data files
--------------------

If you need to collect coverage data from different machines or processes,
coverage can combine multiple files into one for reporting. Use the ``-p`` flag
during execution to append distinguishing information to the .coverage data
file name.

Once you have created a number of these files, you can copy them all to a
single directory, and use the **combine** command to combine them into one
.coverage data file::

    $ coverage combine

If the different machines run your code from different places in their file
systems, coverage won't know how to combine the data.  You can tell coverage
how the different locations correlate with a ``[paths]`` section in your
configuration file.  See :ref:`config_paths` for details.

If you are collecting and renaming your own data files, you'll need to name
them properly for **combine** to find them.   It looks for files named after
the data file (defaulting to ".coverage", overridable with COVERAGE_FILE), with
a dotted suffix.  All such files in the current directory will be combined.
Here are some examples of combinable data files::

    .coverage.machine1
    .coverage.20120807T212300
    .coverage.last_good_run.ok


.. _cmd_reporting:

Reporting
---------

Coverage provides a few styles of reporting, with the **report**, **html**,
**annotate**, and **xml** commands.  They share a number of common options.

The command-line arguments are module or file names to report on, if you'd like
to report on a subset of the data collected.

The ``--include`` and ``--omit`` flags specify lists of filename patterns. They
control which files to report on, and are described in more detail
in :ref:`source`.

The ``-i`` or ``--ignore-errors`` switch tells coverage.py to ignore problems
encountered trying to find source files to report on.  This can be useful if
some files are missing, or if your Python execution is tricky enough that file
names are synthesized without real source files.

If you provide a ``--fail-under`` value, the total percentage covered will be
compared to that value.  If it is less, the command will exit with a status
code of 2, indicating that the total coverage was less than your target.  This
can be used as part of a pass/fail condition, for example in a continuous
integration server.  This option isn't available for **annotate**.


.. _cmd_summary:

Coverage summary
----------------

The simplest reporting is a textual summary produced with **report**::

    $ coverage report
    Name                      Stmts   Miss  Cover
    ---------------------------------------------
    my_program                   20      4    80%
    my_module                    15      2    86%
    my_other_module              56      6    89%
    ---------------------------------------------
    TOTAL                        91     12    87%

For each module executed, the report shows the count of executable statements,
the number of those statements missed, and the resulting coverage, expressed
as a percentage.

The ``-m`` flag also shows the line numbers of missing statements::

    $ coverage report -m
    Name                      Stmts   Miss  Cover   Missing
    -------------------------------------------------------
    my_program                   20      4    80%   33-35, 39
    my_module                    15      2    86%   8, 12
    my_other_module              56      6    89%   17-23
    -------------------------------------------------------
    TOTAL                        91     12    87%

You can restrict the report to only certain files by naming them on the
command line::

    $ coverage report -m my_program.py my_other_module.py
    Name                      Stmts   Miss  Cover   Missing
    -------------------------------------------------------
    my_program                   20      4    80%   33-35, 39
    my_other_module              56      6    89%   17-23
    -------------------------------------------------------
    TOTAL                        76     10    87%

Other common reporting options are described above in :ref:`cmd_reporting`.


.. _cmd_html:

HTML annotation
---------------

Coverage can annotate your source code for which lines were executed
and which were not.  The **html** command creates an HTML report similar to the
**report** summary, but as an HTML file.  Each module name links to the source
file decorated to show the status of each line.

Here's a `sample report`__.

__ /code/coverage/sample_html/index.html

Lines are highlighted green for executed, red for missing, and gray for
excluded.  The counts at the top of the file are buttons to turn on and off
the highlighting.

A number of keyboard shortcuts are available for navigating the report.
Click the keyboard icon in the upper right to see the complete list.

The title of the report can be set with the ``title`` setting in the
``[html]`` section of the configuration file, or the ``--title`` switch on
the command line.

If you prefer a different style for your HTML report, you can provide your
own CSS file to apply, by specifying a CSS file in the ``[html]`` section of
the configuration file.  See :ref:`config_html` for details.

The ``-d`` argument specifies an output directory, defaulting to "htmlcov"::

    $ coverage html -d coverage_html

Other common reporting options are described above in :ref:`cmd_reporting`.

Generating the HTML report can be time-consuming.  Stored with the HTML report
is a data file that is used to speed up reporting the next time.  If you
generate a new report into the same directory, coverage.py will skip
generating unchanged pages, making the process faster.


.. _cmd_annotation:

Text annotation
---------------

The **annotate** command produces a text annotation of your source code.  With
a ``-d`` argument specifying an output directory, each Python file becomes a
text file in that directory.  Without ``-d``, the files are written into the
same directories as the original Python files.

Coverage status for each line of source is indicated with a character prefix::

    > executed
    ! missing (not executed)
    - excluded

For example::

      # A simple function, never called with x==1

    > def h(x):
          """Silly function."""
    -     if 0:   #pragma: no cover
    -         pass
    >     if x == 1:
    !         a = 1
    >     else:
    >         a = 2

Other common reporting options are described above in :ref:`cmd_reporting`.


.. _cmd_xml:

XML reporting
-------------

The **xml** command writes coverage data to a "coverage.xml" file in a format
compatible with `Cobertura`_.

.. _Cobertura: http://cobertura.sourceforge.net

You can specify the name of the output file with the ``-o`` switch.

Other common reporting options are described above in :ref:`cmd_reporting`.


.. _cmd_debug:

Diagnostics
-----------

The **debug** command shows internal information to help diagnose problems.
If you are reporting a bug about coverage.py, including the output of this
command can often help::

    $ coverage debug sys > please_attach_to_bug_report.txt

Two types of information are available: ``sys`` to show system configuration,
and ``data`` to show a summary of the collected coverage data.