File: standard-test-chars-rna.multi.nexus

package info (click to toggle)
python-dendropy 4.2.0%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 68,392 kB
  • ctags: 3,947
  • sloc: python: 41,840; xml: 1,400; makefile: 15
file content (128 lines) | stat: -rw-r--r-- 12,843 bytes parent folder | download | duplicates (6)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX=15;
	TAXLABELS
        a b c e f g h i j k l m n o p
	;
END;

BEGIN CHARACTERS;
	DIMENSIONS NCHAR=256;
	FORMAT DATATYPE=RNA GAP=- INTERLEAVE=yes;
	MATRIX
a    {AGU}G-A{AG}{AC}GG{CU}UA{ACG}{AGU}{AG}A{ACU}{ACU}A{CGU}{ACGU}{CGU}U{ACGU}{AC}{ACG}U{AG}{CG}UU{AU}{CU}{AGU}{AU}U{AU}{AG}{CG}{AU}{CU}{GU}C
b    .{CGU}.{ACGU}.{ACGU}{CGU}.{AG}U..{ACGU}{AU}{AC}.AG..{ACU}{ACG}U.A{AC}{AGU}-.{ACGU}{AC}{ACGU}{GU}{ACGU}{AU}{AGU}CUA.{CG}{CGU}
c    {AC}{AU}C.{CG}.{CU}{ACGU}G.{CGU}{CGU}{CU}.{AU}UC{ACU}.{AC}U{CGU}.{ACGU}{CU}{AU}{AU}{AC}.{ACGU}{CGU}{CG}.{CGU}{CU}{AC}UG.{CGU}.{CG}
e    {AGU}{AG}{CG}{AU}A{CGU}U{CGU}{AC}.{ACGU}{ACGU}.{CG}..{AGU}{CGU}U{ACGU}.{ACU}C-.{ACU}...{CG}U{ACU}.{ACGU}{AGU}{CG}{CGU}A{ACG}..{AG}
f    {CGU}{AG}{AGU}G{CGU}-{CU}{ACG}AA{ACGU}{GU}{CGU}G{CGU}.{AGU}CC..{ACGU}.{ACG}{CU}{ACG}....{AC}{ACG}C.{AG}.{ACGU-}G.U{AU}.
g    ..U{AG}C{AGU}.C.{CU}G{AU}GU{AGU}...{AGU}.{AC}.{CG}..C.G{CG}.{AG}A.{ACGU}{ACGU}{ACU}{AU}{CG}C{ACGU}{ACGU-}{AU}
h    {AG}{ACU}{AGU}{CU}.-.{CG}{GU}UA{CGU}{AU}{ACGU-}G.{ACU}{ACU}{ACGU}{AGU}{ACU}.{GU}{AGU}{AG}.GC..{ACGU-}..{ACGU-}G{CG}U.A.C.
i    .{CG}{CU}G{AGU}{AU}{GU}A{AG}{AU}.-.A{GU}GG.{GU}{ACU}{AU}{CU}A{CG}{AG}{GU}C{AG}{AU}AC{AU}.G..{ACGU}U{AGU}{AGU}.{AC}
j    {AG}{AU}AGA{ACU}{CG}{ACGU}.{ACU}{AG}.{ACU}.{AG}{AG}{AG}{AC}.{CGU}{AU}{CGU}{AGU}{ACU}{AGU}..{ACU}{AGU}G{ACGU}U{AC}{AC}.{ACGU}{ACU}{ACG}{ACGU}{ACU}{ACU}A
k    {ACG}{ACU}{AGU}A{AU}.{CU}{ACGU-}{GU}{ACGU}{CG}GG{ACGU}{CU}A{AG}.A{ACG}{ACU}G{CG}{ACGU}{ACG}.{ACGU-}U{AG}{CGU}{CU}U{AU}{CG}.{GU}{AGU}{ACGU-}A{GU}..
l    {AC}{AC}{CGU}{CU}{CGU}{AC}{ACU}.{AC}{ACG}G.G{ACGU}{ACG}{AU}.{ACU}{ACGU}{AU}{ACGU}{AGU}U{CG}{CG}{ACG}{ACG}{AGU}C{CU}..{ACGU}{CU}{AG}{ACGU}{AG}{ACGU}A.G{GU}
m    -{CGU}A{ACGU}-{AG}{GU}{AU}G{CGU}.{ACU}{ACG}A.C{ACGU-}{ACU}{GU}..C{CG}{ACGU}{ACU}.{CGU}{CGU}{GU}{AU}.{ACU}.U.{AG}CG..{ACG}{GU}
n    {ACGU-}{AGU}{CG}.-U.{GU}U.{ACU}{GU}AUAG{CGU}.{ACGU}{ACGU}.C..C{ACGU-}G.{CG}C.{ACG}..{AU}{CGU}{GU}{CG}{ACGU-}{ACU}..
o    {AU}{ACGU}{GU}U{CG}{AGU}{ACU}..{AG}{ACGU-}.{ACU}U{CU}.{AGU}{ACGU-}{CG}..{GU}U.{AG}.{AG}{AC}{ACG}C.A{AGU}{CGU}.{ACG}{AGU}{GU}{ACGU}{ACU}{AGU}.
p    ..{GU}{ACG}{AU}.{AG}{CG}{AGU}{ACU}.{CGU}{AU}{ACG}.{AC}{AU}{CGU}{AGU}.UC{ACG}{ACU}{GU}{AG}{ACU}{ACGU}C..{ACGU}{AG}.{ACGU-}{AC}{ACG}{AU}UUCA

a    {ACG}CA{AC}{ACGU}{ACGU}{AC}{AC}{ACU}{ACU}{CU}C{ACG}{GU}AG{CGU}U{AGU}{ACG}{ACGU}{AG}{AGU}{AU}{ACGU}{CU}{CG}{ACG}GUU{AGU}{CG}{ACGU}{ACGU}{CGU}{CG}U{ACGU}A{ACG}{CG}
b    {CG}G.G{ACGU}.{AGU}UG...{CGU}{CGU}{AC}{ACU}{CGU}.UC{ACU}CGC.{ACU}..{CG}{ACGU}.{AC}{AU}{AU}{CG}{CU}A{AGU}C{AU}{CG}.
c    {AG}.{ACG}{ACU}..{CGU}.G.{CG}{ACU}{AU}{AG}{AC}{AG}A{AC}{AC}U{CGU}{GU}AU.{ACU}A.{ACU}{AC}{AGU}{ACGU}{AG}A{CU}{AU}..{ACGU}{AG}UA
e    -{AC}{ACG}GC.{CGU}.C.{ACG}.{CU}{CGU}{AC}{AC}{ACU}.{ACGU}C{AGU}.G{ACGU}G.CA{ACU}.GC{AC}{AG}{CGU}{ACGU}-.{AGU}{AC}UA
f    {AGU}{ACGU-}.C.{ACG}G{CGU}..U{AGU}.{AC}{ACGU-}..{AC}.{AC}.{CU}G{CU}{AC}{AC}U{ACGU}{AU}C{CG}.{ACGU-}C{CU}..{GU}GC.{ACU}
g    ..{AGU}{ACGU}{AU}A{AGU}{CGU}.{AU}-{CGU}UG{ACGU}{CG}.{ACGU}U{AG}{ACG}{GU}{CG}{ACGU-}{GU}{ACU}.{CU}{CU}{AC}{CU}{GU}..A{ACU}{AC}{CG}C.{CG}G
h    .{CG}{AU}A{ACG}{ACU}C{ACGU}A.G{AC}{ACU}-{ACG}G{AG}{CU}-{CGU}{ACGU}.{AGU}-{ACGU}{ACU}-A.{GU}..CC{AC}{ACGU}U{AGU}{ACG}{GU}.{ACG}
i    U..{CU}{GU}{CU}{CG}....{ACU}A{CGU}.{AU}{CG}.{AU}{CU}{CG}.{ACGU}{GU}UG{AC}.{ACG}C{AGU}{ACU}G{AC}{ACG}{AGU}{ACG}AG.{CU}.
j    ..{GU}{CG}{CGU}{GU}{GU}GU.{GU}A{CU}{AGU}...{AU}{ACG}.{AGU}{ACGU}..{AG}{ACG}{ACU}U{CGU}{ACU}{AG}{GU}{ACGU}.{AGU}A{CGU}-.{AC}{CGU}{ACU}
k    .{CU}{CGU}.{CG}{ACG}.C{CGU}{ACGU-}{ACG}{CGU}{GU}{AG}..{ACG}{ACGU-}{ACU}U.{ACG}{AU}{CGU}{AU}.A{ACU}.{ACG}{ACG}AU{GU}.{AGU}..{ACGU}{ACGU}.C
l    GU..{CGU}{CG}{GU}.C{AU}{AC}{ACGU-}A.{CGU}{AU}{ACGU}.A{AG}G{ACU}.A.{ACGU}U.{CG}{CGU}.{AG}.{AGU}{ACU}.{ACGU}{CG}.C{AC}{AG}
m    G{ACGU}{ACG}{ACG}A{CGU}{CU}.{AG}A{ACGU-}G.{ACG}A{CG}{GU}G.A{AG}{AGU}{GU}..C..{CGU}{AC}A{ACG}{CU}{ACG}..{ACU}C{GU}{AC}{AU}.
n    .A{AC}-C{AC}A{GU}CA-{ACU}.{ACGU}{AGU}...{ACU}{ACGU}{CG}.GA{AGU}..{AU}{CGU}{ACG}AC.{AG}U{CG}-{ACGU}{GU}{AG}{ACG}.
o    {ACG}{AU}{ACU}{CGU}.{GU}{GU}{AG}{AU}{AC}{ACG}{AGU}{AC}.{GU}AC{CG}G{ACGU-}{CU}{ACU}{ACU}{CG}{ACGU}{AU}.{CGU}{AC}{ACGU}AG{AC}{ACGU-}.{ACU}C{ACGU-}.{AGU}{ACGU-}{AG}
p    .G..{ACGU}{AU}{AG}{CG}{AG}.G{AGU}{AU}{GU}{AG}{CGU}.{ACU}{AC}{ACU}{AG}{AU}-.{AU}{AGU}{ACG}{CGU}A{ACGU}.C..{AC}{GU}U{ACG}{CG}{AC}U{ACGU-}

a    {ACGU}AG{CU}{ACGU}G{AGU}{ACG}{ACG}{AGU}{ACU}{AGU}{CG}{CGU}{AC}{CU}GC{AC}GU{ACG}{ACGU-}C{AGU}{CGU}-{AGU}{AG}{AU}{AGU}{CGU}C{AU}{ACG}{GU}G{ACGU-}{ACGU}{ACG}{CU}A
b    {ACU}{AC}{AG}G{AGU}{CU}.{ACGU}{AU}{ACGU}A{CU}{ACGU}.{AG}{AC}.-{ACG}{CGU}{CGU}U{ACGU}{ACGU}.U{ACGU-}{CU}{CU}{ACGU}{AU}-{ACGU-}A{AG}.{CU}{AGU}.C{AU}.
c    {ACG}....G{AC}{ACGU-}.{ACGU}..C{CG}{ACGU-}{ACG}.{GU}{ACGU}.{CU}{ACG}UC.{ACGU-}{GU}.{AC}{AG}{AC}{ACG}{ACGU-}U.{GU}{AU}.{AG}G{AGU}.
e    .{AC}G{GU}{CGU}..{AG}..{AU}{ACGU}.{AU}{AC}{AG}{CG}{AGU}{ACGU}.{AU}.{AG}{ACGU}..{CGU}.{AU}G{CG}{AU}{AU}{GU}{AGU}U{CG}{ACGU}C{AU}CC
f    .{CU}{ACG}CC{ACGU-}{AG}A.{CU}{ACG}{CG}.A{GU}{AGU}.{CU}{AU}{AU}{GU}CA.{AU}.{ACU}.UG{CGU}{GU}{AU}.{ACGU}{GU}C{ACGU}{AGU}{CGU}{AU}{CGU}
g    G.{ACG}..{AG}{AG}A{CU}{AU}.GA{ACU}.G{AU}{AGU}.{CU}.{CU}{AG}{AGU}.{CG}{CG}U{AGU}{ACG}{CG}{ACU}{AGU}{CG}{CU}.{CU}{GU}{GU}{ACGU}{CG}{AGU}
h    {ACGU}..{CG}{AGU}{ACU}.{CG}{GU}{CGU}{ACGU}{AU}.{CG}{GU}{CG}.{CGU}.U{ACGU}{ACU}{ACU}A.-GC..{ACG}{ACU}{CU}.A..{AU}A{CG}{AU}{CGU}
i    {ACGU}G..{AG}{AU}.{AU}{CGU}{AG}{ACGU-}{CU}..C.{AG}.{ACGU}{AU}{GU}{AGU}{AG}{ACGU}{GU}{ACGU}{AGU}.{CGU}{GU}{ACGU}{ACU}{GU}.{CGU}G{ACGU}.{CG}.{GU}.
j    {GU}{AGU}.-{ACGU}U{AG}G...{AGU}{ACU}C{CG}{ACG}{CU}A{AC}{ACG}{GU}{ACGU}{AGU}{CG}.{AC}{AU}C{ACGU}G{AGU}{AG}.{CG}-{GU}..{CU}{AU}{ACG}{CU}
k    {AC}{AC}{ACU}.{CGU}{CGU}.{AC}{AC}{CU}{ACGU}{ACU}-{AC}.U{ACGU}{AU}{AC}{CGU}AC{ACU}{CG}{CU}{AC}....{CGU}.U{CGU}{ACG}.{GU}{ACG}{CG}{CU}{ACG}C
l    {CU}{ACGU}.{AGU}{CU}{AU}{ACGU}{ACU}A{GU}{ACGU}..{CU}.{CU}{CU}.{ACU}.{CGU}{CG}.{AC}.{CGU}.A.{ACGU}-U{CG}{CG}{AGU}{ACGU}{AG}{GU}A{CU}{AU}C
m    .{AG}{ACG}G{CU}UCC.{ACGU}{AGU}.{CU}.{CG}{ACG}{AU}{CG}{CU}CC{ACGU}C.{ACU}U{CU}{CU}{AU}.U{ACG}.{AGU}{AG}{AG}{CG}.{CG}{ACU}{CGU}G
n    .{ACGU}C...{ACGU}{CU}C{CG}.{ACU}CA-..{CU}{ACU}{CG}{CU}AC{ACU}C{AU}.{AC}{CU}{ACG}{ACGU}{GU}.{ACU}.C{CG}UU.{AC}U
o    .{ACGU-}.{GU}{AC}{AG}{ACG}{AC}{ACGU}.C{ACGU}{ACGU}C{ACGU-}..{AG}UC{AC}.{ACU}UA.{CG}{ACU}.{ACG}{CU}{CU}.{ACGU-}{CGU}{AU}A{AG}.{AG}{ACG}{CGU}
p    {CGU}G{AG}.{ACGU}{CGU}{ACU}{AU}.AU{AC}.{CU}{ACGU}.{AGU}{ACGU}.{ACU}GG{ACGU}{CU}{ACGU-}{AC}{ACGU-}C{ACU}{AU}..{CGU}-.{AG}{CGU}{CU}{CG}{AC}{ACU}{AG}

a    {AU}{CGU}A{ACG}{ACG}{AU}{CG}{AGU}C{AGU}U{ACGU}{AC}UU{ACG}{CU}C{AU}{ACGU}{CGU}CA{AU}-CC{GU}{CG}{ACGU}{GU}{ACU}{CU}{ACU}UA{ACG}-U{ACGU}{AGU}{CGU}
b    ..{CU}.{GU}-.U{CU}{ACGU-}C.{AU}{CGU}{ACU}{ACU}C{AU}G.{AC}{CG}C{ACG}{ACGU}{CG}U{AU}{ACGU}.{AU}{AC}{ACG}U{AC}..{ACGU}A.{ACG}C
c    .GU{AC}G{ACU}-{AU}GUGA.{AGU}{CU}{ACU}G{CG}{GU}{CGU}{AG}.UC{ACG}-C{AG}.{CG}{AGU}{ACG}{AC}{CU}.{AU}{ACGU-}G{ACU}{ACG}{AU}{CU}
e    ..A{CGU}{CU}{ACGU}.{ACU}{CGU}{AG}-{CU}{AG}{CU}{AC}{AU}{AC}G{AU}{ACG}AU{AGU}{AGU}{AGU}{ACGU}.C{ACGU-}{AG}{CU}G{ACGU}{ACGU}{CU}{CU}U{GU}{CU}{AGU}..
f    {ACGU}A-{CGU}{GU}.{GU}{AU}{AG}.C{ACU}{AG}{GU}{ACGU}{ACG}{AC}.C{AU}{ACU}C.{AG}{ACGU}.{CG}{AGU}A{GU}{ACG}.U{CU}G{GU}..{CG}..{ACGU}
g    G{CG}{AC}{AG}{AGU}{ACGU}{ACGU}{AG}{AGU}G{GU}G.C{ACGU-}A.-CG{ACG}{CGU}{ACGU}{ACGU}{GU}{AC}{AGU}AU{AU}...{ACGU-}{AU}.G{CU}A.{ACGU}{AGU}
h    {CU}.{CU}C{CU}.A..{ACGU}{ACGU}{AU}{ACG}{ACU}{CG}{AC}.{ACU}{ACG}..{AGU}{CG}{ACGU}{CGU}{ACG}{ACG}{AGU}G{ACGU}{ACU}{AG}{CGU}.{AGU}{ACU}A.{ACGU}{ACU}.C
i    A.{AG}{AU}{AG}{AU}.{AG}U{AG}..{AG}{AU}{AG}...CC{CG}.{AC}GG{GU}{ACG}G{ACG}..{AC}{AU}{AGU}{ACG}.{CG}{ACGU}{AG}{CU}..
j    .{AG}{CU}.{AC}.CA..{AU}{AU}{CU}G..{AG}-{AGU}G{AGU}{GU}-{AG}{AGU}.U{CGU}{AU}{AG}{ACGU}{CU}G.{AC}{ACG}{AU}{ACG}C{ACGU-}{AC}{AGU}
k    {AC}{AG}{GU}..U{AC}.{ACU}GU{AU}{ACU}.{ACGU}{AC}.{AC}{ACG}{ACG}{ACGU}.{ACGU-}{CGU}{ACGU}{AC}{CG}{ACGU}.A{AC}.{ACGU}{ACGU}GU..-.{ACGU}{ACGU}
l    .{CGU}.{CU}{CG}U{CGU}.A{ACU}C{CG}-{ACU}..G{AU}.{AGU}..{ACG}{AG}.{AG}..{ACG}{AC}.{AC}.{ACGU}.{AGU}C{GU}{CU}G{ACU}{AU}
m    {AU}{ACU}{CGU}.{ACU}{AC}A{CGU}{AGU}...UC{AC}{ACGU}.CU{CGU}{AC}.{ACGU}G{CG}{GU}{GU}G--{CGU}{ACU}{AG}{CGU}..UG{AC}{AG}{ACGU}{ACG}
n    {CGU}.{ACU}U{ACGU}{AG}{AG}{AG}{ACU}.{ACU}.{AG}{GU}GA{ACGU-}{AGU}U{AU}{GU}{ACG}{AU}{CU}C.{AU}AU{AC}.{ACG}{ACGU}{ACU}{AG}.{ACU}...A{AC}
o    A{AC}AG.{AGU}{AC}.U..{AGU}{AU}-A{AU}C{AGU}{ACGU}{AC}{GU}{ACU}{AGU}{ACGU-}{GU}..{CG}.U-{AG}U{AGU}.GG{AU}-.{CG}C
p    ....{ACGU}{ACGU}G{CGU}.UA{ACGU-}.{AC}{ACU}{CG}.{CG}{AGU}.G{CU}{CGU}G{ACG}{CG}.{AU}{ACU}AC.{CG}{AGU}{ACU}C.{ACU}{ACG}{CGU}A{CG}

a    {AGU}C{AC}{CGU}{CU}{ACGU}GG{AC}{ACGU}{CU}{ACGU}{ACG}{ACGU}{GU}{ACG}U{GU}{ACG}{CGU}{AG}CU{AU}{ACG}{GU}C{ACG}{AGU}{CGU}{AU}{ACG}{ACU}{GU}A{CG}{CG}{ACGU}C{AGU}{AU}{AGU}
b    {CGU}AA{ACGU}UG{AGU}A{ACGU}.{AGU}..{CU}UC-{AC}{AC}{AC}{ACU}{CG}.G{AG}{CGU}{AU}..C{CGU}{AC}{CG}{AU}{ACGU}{ACGU}{AG}{GU}{ACGU}GA.
c    .{AU}.{ACU}.{AGU}{CGU}{CG}.{AGU}{AC}{AG}C{GU}U{CG}...{AG}U{AC}{ACG}.{ACGU}{CG}.UUU.{AU}{GU}.{ACG}{GU}{ACGU-}{AG}..{ACGU}{ACGU}
e    {CG}{CU}{CGU}ACU{ACGU}U{CGU}C{GU}{ACU}.AU{ACGU}.{AC}{AU}A{CU}..U{AG}.{CGU}..U{CGU}.C{ACG}.{AGU}{ACG}{ACGU}{CG}.{ACGU}{AG}
f    -..{AU}{GU}{ACG}{ACGU}{GU}U{GU}{CGU}{CG}{CGU}{ACGU-}{AC}GCU{ACGU}{ACGU}{CG}UC.{ACGU}{ACGU}.{GU}{AG}G.-{ACG}{ACG}{ACGU-}{ACG}A.{AG}{ACGU}{ACG}{AGU}
g    .{GU}{AG}{AC}{ACU}.{GU}C.{AU}.{AG}{CU}{CGU}{CG}.{ACGU}{AC}{AG}.{AGU}.U{AG}{GU}{CU}-.{ACGU-}G{CGU}{CG}-.{ACGU-}{ACU}{ACU}C{ACGU-}{ACGU}G-
h    {AG}A{ACU}{ACGU}{AU}{CGU}..{GU}.{GU}G{AGU}C.{ACGU}{CU}{CU}{CU}{AG}G.{CG}UC..{ACGU}{AC}{AC}G{CGU}{ACGU}{CGU}{CG}-{CU}.{ACGU}{ACG}{CG}C
i    {ACGU}{AC}...{AG}.{AGU}{CU}.C-{GU}.{ACU}{AGU}-{CU}{AU}{ACGU-}{CG}G{ACGU}.{GU}U{CGU}.{GU}{ACG}.G{AGU}U.{AC}G{ACG}..G{AC}
j    {CGU}{AC}..{ACU}..{ACG}{ACGU}{CU}-.CCC{GU}{ACG}{ACGU-}{ACU}.{CG}{AU}{CGU}.U{CU}{GU}{AC}{AG}.C{AC}{CGU}C{ACU}..{ACG}{AGU}.A{CG}
k    {CG}{ACGU-}{ACG}.G-{ACGU}{AGU}{ACGU}{ACGU}C.{AC}{CG}{CGU}{AU}GAG{AGU}{ACG}{ACU}{AG}{AU}{CG}{AGU}{ACGU}.{ACGU}C{CGU}{CGU}C{AC}.{AG}{CG}{AG}.{CG}A{ACG}
l    {AG}{ACG}{CU}{AGU}{AC}{GU}{AGU}{GU}{AG}{AC}{AG}.{CG}{CU}{ACGU-}{ACU}{AGU}.G{AG}{ACU}.{ACG}.{ACGU}{CU}.{CGU}{AG}{GU}G-C{CG}{AC}{ACGU}{ACGU}{AGU}A{ACGU}.{ACGU}
m    A{ACU}{ACGU}C{ACG}{AGU}{CU}{CGU}{CGU}.{GU}{ACU}.C.{ACU}{ACGU}.{ACGU}{ACU}G{AGU}AG...{CGU}{CU}{CGU}{CG}{GU}{ACG}.{AC}{GU}{ACGU}{ACG}{AC}{ACG}UU
n    .{CU}.G{GU}{CU}{ACGU}.{ACGU}.GG..{AGU}.{ACGU-}{AU}C{ACGU}C{CG}{CGU}{ACU}.{ACGU}{ACU}C-U.{AG}..{AGU}{AU}{ACGU}{AC}{GU}{AU}{GU}.
o    .A{AU}U{AU}{ACGU-}{CU}A{ACGU}{AGU}{AG}{AG}{CU}{ACU}{ACG}C{ACG}C{ACGU}{ACG}{ACG}{CG}{CGU}G{GU}{AU}{AGU}U{GU}..G.{AG}{GU}{AG}{ACGU}{ACG}{AGU}{CU}{AC}A
p    {CU}.{ACU}.{AG}{AC}{ACGU}G-{CGU}.{AG}{ACGU}{AG}{AC}{ACU}A{AC}{AG}{AU}{AGU}{ACGU-}{AU}{ACGU-}C..{AU}.{ACG}{CU}{ACU}C-{ACU}G{AU}G{ACU}{AU}{ACGU}.

a    {ACGU-}{ACG}{CGU}{CU}{AU}{ACU}{CGU}{GU}C{AG}{CG}{AGU}{ACU}{ACGU}A{AU}{ACG}C-{CG}-{ACGU}G{ACU}U{AG}{CGU}{ACU}{AG}{CG}{GU}U{CG}{AU}{AU}{CU}{AC}{ACU}{CU}{AG}UU
b    {ACU}.{ACGU}C.{CG}.{CGU}{ACU}.G{ACU}{CG}..{ACGU}{CG}U{ACU}.{CU}.{CGU}{ACGU}G{AGU}.U{ACU}-{ACG}.UC.{ACG}{CG}{ACGU}{AGU}{AC}-.
c    {AC}{ACGU}{AGU}.{ACGU}C{CGU}..U..{ACG}{AG}{CU}{ACU}{ACU}.{CG}C{ACG}.{ACG}.{AGU}..{ACGU}{ACGU}{AG}U{GU}{ACU}.{ACGU}{ACU}{AG}{ACG}..{AC}{CGU}
e    .{GU}AUAA.{AG}.{ACGU}{GU}{ACGU}{CG}C.{CU}.{AG}{CG}.{ACGU}{ACGU}{CU}-{CU}{GU}.{ACGU}{CU}.U{AU}U{CG}C{CGU}A{CG}{AG}.CU
f    {ACU}{GU}{ACU}{AG}.{CGU}{ACG}U{CGU}{AU}{AG}-..-.{GU}UCGA..{ACGU}{AG}.C{CGU}..U..{CGU}{ACGU}{AU}{ACG}{ACGU}C{AGU}{GU}.
g    {CU}{AU}-A{GU}AACG{ACG}{AU}G{AC}-{ACGU-}..{GU}C{AGU}{ACGU}G{ACGU-}{AGU}{CU}{AGU}{CGU}CC{CGU}.{ACGU}AG{ACG}.{CU}UAC{AU}{CU}
h    {AGU}{AG}...U{AU}{CG}{AC}C{ACGU-}..{ACGU}{ACGU}..GAA.{AGU}C{ACG}{CGU}-.G{AGU}{AGU}{AC}...{GU}{AU}CUG...
i    ...{AGU}{CU}G{ACGU}G{CU}{ACGU-}{ACGU}{CG}A{GU}U{CU}.{AC}{ACG}A.{AGU}G{AC}CA{ACGU}A{ACGU}.{ACU}...{CGU}{ACU}{CU}{CG}U{ACGU}C.
j    .{GU}{CG}A.{AC}.{AGU}{ACG}{AU}C.{ACGU}..{CGU}{ACGU}{ACG}{CU}{AG}A{AGU}A{AGU}{ACGU}{CU}{AG}C{CU}{CU}{ACU}C{CGU}.A.{AGU}GC{ACG}{ACG}.
k    {CG}.U.{ACGU}-AU-G{AU}{ACGU-}{AGU}{AC}GC{ACG}A{GU}{AGU}{GU}U{CG}{CGU}{ACG}{GU}{AU}{CGU}{ACU}G{ACG}.{CG}C{CU}U{ACG}{ACGU}.C{CG}{ACG}
l    C{AG}{CG}U{AG}A{AG}CG{CGU}..{AC}U{AU}{AU}{GU}{ACGU}A{CGU}{ACGU-}{GU}C{ACGU}{ACGU}...{AC}{AC}..{GU}G{ACU}G.{ACG}G.{ACG}{ACU}
m    {ACG}...AC{AU}{CGU}{ACGU}{AGU}{ACU}A{AG}{ACU}{ACU}{CU}{AG}.A{ACGU}{ACG}G-.C{AG}{ACU}{ACGU-}.{AGU}.{ACU}...CU{CU}{ACGU}{ACGU}C{AGU}
n    {AG}.{AC}{ACGU}{CG}{CG}..{ACGU-}{ACG}A{CG}A{AU}U.G{ACGU}{AG}{ACGU-}{CGU}...C.C.{ACGU}U{AC}{GU}{AC}{AU}.{GU}.A{AG}.C{CG}
o    .{CU}UG.{AGU}{CGU}C.{CU}{ACG}C{AG}{ACG}{ACG}{CG}{ACU}U...G{ACG}{ACU}.G.{AU}{CGU}U{AG}{AG}{CU}{CGU}{ACGU}{CG}{CGU}{AG}U.{AU}.
p    -{ACGU}{AG}G{CG}{CG}{AU}{CGU}{AC}U{ACGU}{CG}{AU}{CGU}{ACGU}{AU}.{ACG}{ACG}{CU}{AGU}{CU}.{CU}.C{CU}.{ACGU-}{ACG}U{ACU}{AG}{ACGU}.{ACGU-}{CU}{AG}U{CG}{AG}G

a    {CU}{AU}{AG}{ACG}
b    {AC}.C{AC}
c    ..{AU}{ACGU}
e    ..A{ACGU-}
f    {AGU}G.{ACGU}
g    AA.C
h    {AU}{CG}{ACU}{ACU}
i    .{ACG}.{AG}
j    {CGU}{GU}C{AU}
k    C{AC}{GU}.
l    .{ACG}{AGU}{CU}
m    {AGU}C{CU}.
n    .{ACGU}{ACG}{CG}
o    -{CG}-{AG}
p    {CU}.U{ACGU}
	;

END;