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/*****************************************************************************
*
* Copyright (c) 2003-2020 by The University of Queensland
* http://www.uq.edu.au
*
* Primary Business: Queensland, Australia
* Licensed under the Apache License, version 2.0
* http://www.apache.org/licenses/LICENSE-2.0
*
* Development until 2012 by Earth Systems Science Computational Center (ESSCC)
* Development 2012-2013 by School of Earth Sciences
* Development from 2014-2017 by Centre for Geoscience Computing (GeoComp)
* Development from 2019 by School of Earth and Environmental Sciences
**
*****************************************************************************/
#include "EscriptDatasetTestCase.h"
#include <weipa/EscriptDataset.h>
#include <weipa/WeipaException.h>
#include <escript/DataFactory.h>
#include <escript/FunctionSpaceFactory.h>
#if USE_DUDLEY
#include <dudley/DomainFactory.h>
#endif
#if USE_FINLEY
#include <finley/DomainFactory.h>
#endif
#if USE_RIPLEY
#include <ripley/Brick.h>
#endif
#if USE_SPECKLEY
#include <speckley/Brick.h>
#endif
#include <cppunit/TestCaller.h>
using namespace CppUnit;
using namespace escript;
using namespace weipa;
using namespace std;
TestSuite* EscriptDatasetTestCase::suite()
{
TestSuite *testSuite = new TestSuite("EscriptDatasetTestCase");
testSuite->addTest(new TestCaller<EscriptDatasetTestCase>(
"testBase",&EscriptDatasetTestCase::testBase));
#if USE_DUDLEY
testSuite->addTest(new TestCaller<EscriptDatasetTestCase>(
"testDudley",&EscriptDatasetTestCase::testDudley));
#endif
#if USE_FINLEY
testSuite->addTest(new TestCaller<EscriptDatasetTestCase>(
"testFinley",&EscriptDatasetTestCase::testFinley));
#endif
#if USE_RIPLEY
testSuite->addTest(new TestCaller<EscriptDatasetTestCase>(
"testRipley",&EscriptDatasetTestCase::testRipley));
#endif
#if USE_SPECKLEY
testSuite->addTest(new TestCaller<EscriptDatasetTestCase>(
"testSpeckley",&EscriptDatasetTestCase::testSpeckley));
#endif
return testSuite;
}
void EscriptDatasetTestCase::testBase()
{
cout << endl;
cout << "\tTest default constructor." << endl;
EscriptDataset_ptr dataset(new EscriptDataset());
#ifdef ESYS_HAVE_SILO
cout << "\tTest saveSilo without data." << endl;
CPPUNIT_ASSERT(dataset->saveSilo("dummy") == false);
#endif
cout << "\tTest saveVTK without data." << endl;
CPPUNIT_ASSERT_THROW(dataset->saveVTK("dummy"),weipa::WeipaException);
cout << "\tTest getConvertedDomain without data." << endl;
CPPUNIT_ASSERT(dataset->getConvertedDomain().size() == 0);
cout << "\tTest getVariables without data." << endl;
CPPUNIT_ASSERT(dataset->getVariables().size() == 0);
cout << "\tTest getMeshVariables without data." << endl;
CPPUNIT_ASSERT(dataset->getMeshVariables().size() == 0);
}
#if USE_DUDLEY
void EscriptDatasetTestCase::testDudley()
{
JMPI info=makeInfo(MPI_COMM_WORLD);
Domain_ptr dom(dudley::brick(info));
cout << "Running Dudley tests..." << endl;
runDomainTests(dom);
}
#endif
#if USE_FINLEY
void EscriptDatasetTestCase::testFinley()
{
JMPI info=makeInfo(MPI_COMM_WORLD);
Domain_ptr dom(finley::brick(info));
cout << "Running Finley tests..." << endl;
runDomainTests(dom);
}
#endif
#if USE_RIPLEY
void EscriptDatasetTestCase::testRipley()
{
Domain_ptr dom(new ripley::Brick(5,4,3, 0,0,0, 1,1,1));
cout << "Running Ripley tests..." << endl;
runDomainTests(dom);
}
#endif
#if USE_SPECKLEY
void EscriptDatasetTestCase::testSpeckley()
{
for (int i = 2; i < 11; i++) {
Domain_ptr dom(new speckley::Brick(i, 5,4,3, 0,0,0, 1,1,1));
cout << "Running Speckley order " << i << " tests..." << endl;
runDomainTests(dom);
}
}
#endif
void EscriptDatasetTestCase::runDomainTests(Domain_ptr dom)
{
EscriptDataset_ptr dataset(new EscriptDataset());
Data data = Scalar(0.0, continuousFunction(*dom), true);
cout << "\tTest addData with NULL domain." << endl;
CPPUNIT_ASSERT(dataset->addData(data, "foo", "bar") == false);
cout << "\tTest setDomain." << endl;
CPPUNIT_ASSERT(dataset->setDomain(dom.get()) == true);
CPPUNIT_ASSERT(dataset->getMeshVariables().size() > 0);
cout << "\tTest bogus setDomain call." << endl;
CPPUNIT_ASSERT(dataset->setDomain(dom.get()) == false);
cout << "\tTest getConvertedDomain." << endl;
DomainChunks chunks = dataset->getConvertedDomain();
CPPUNIT_ASSERT(chunks.size() > 0);
StringVec varfiles, varnames;
varfiles.push_back("testvar%04d.nc");
varnames.push_back("testvar");
cout << "\tTest bogus loadNetCDF call 1." << endl;
CPPUNIT_ASSERT(dataset->loadNetCDF("mesh%04d.nc", varfiles, varnames, 1) == false);
cout << "\tTest bogus loadNetCDF call 2." << endl;
CPPUNIT_ASSERT(dataset->loadNetCDF(chunks, varfiles, varnames) == false);
cout << "\tTest addData with valid data." << endl;
CPPUNIT_ASSERT(dataset->addData(data, "testvar", "cm") == true);
CPPUNIT_ASSERT(dataset->getVariables().size() == 1);
cout << "\tTest set/getCycleAndTime." << endl;
dataset->setCycleAndTime(42, 3.1415);
CPPUNIT_ASSERT(dataset->getCycle() == 42);
CPPUNIT_ASSERT(dataset->getTime()-3.1415 < 0.001);
dataset->setMetadataSchemaString("xmlns:test=\"http://myschema.com/test\"",
"<MyValue>4711</MyValue>");
dataset->setMeshLabels("x-axis", "y-axis", "z-axis");
dataset->setMeshUnits("km", "cm", "mm");
dataset->setSaveMeshData(true);
#ifdef ESYS_HAVE_SILO
cout << "\tTest saveSilo." << endl;
CPPUNIT_ASSERT(dataset->saveSilo("domaintest.silo") == true);
ifstream f("domaintest.silo");
CPPUNIT_ASSERT(f.is_open());
f.close();
#endif
cout << "\tTest saveVTK." << endl;
CPPUNIT_ASSERT_NO_THROW(dataset->saveVTK("domaintest.vtu"));
checkVTKfile("domaintest.vtu");
}
int EscriptDatasetTestCase::getDataArrayLength(std::istream& is)
{
int length=0;
char line[256];
while (is.good()) {
is.getline(line, 256);
string s(line);
if (s.find("</DataArray") != 0)
length++;
else
break;
}
return length;
}
void EscriptDatasetTestCase::checkVTKfile(std::string filename)
{
ifstream f(filename.c_str());
CPPUNIT_ASSERT(f.is_open());
char line[256];
int numPoints=0, numCells=0;
while (f.good()) {
f.getline(line, 256);
string s(line);
size_t pp = s.find("NumberOfPoints=");
size_t cp = s.find("NumberOfCells=");
if (pp!=s.npos && cp!=s.npos) {
stringstream ss;
string tmp(s.substr(pp+16));
ss.str(tmp);
ss >> numPoints;
tmp = s.substr(cp+15);
ss.str(tmp);
ss >> numCells;
break;
}
}
CPPUNIT_ASSERT(numPoints>0);
CPPUNIT_ASSERT(numCells>0);
bool pointsFound=false, cellsFound=false;
int numPointData=0, numCellData=0;
while (f.good()) {
f.getline(line, 256);
string s(line);
if (s.compare("<Points>") == 0) {
pointsFound=true;
// check node coordinates
while (f.good() && s.find("</Points>") != 0) {
f.getline(line, 256);
s = line;
if (s.find("<DataArray") == 0) {
CPPUNIT_ASSERT_EQUAL(numPoints, getDataArrayLength(f));
}
}
} else if (s.find("<Cells>") == 0) {
cellsFound=true;
// check cell info (connectivity, offsets, types)
while (f.good() && s.find("</Cells>") != 0) {
f.getline(line, 256);
s = line;
if (s.find("<DataArray") == 0) {
CPPUNIT_ASSERT_EQUAL(numCells, getDataArrayLength(f));
}
}
} else if (s.compare("<PointData>") == 0) {
// check nodal data
while (f.good() && s.find("</PointData>") != 0) {
f.getline(line, 256);
s = line;
if (s.find("<DataArray") == 0) {
numPointData++;
CPPUNIT_ASSERT_EQUAL(numPoints, getDataArrayLength(f));
}
}
} else if (s.find("<CellData>") == 0) {
// check cell data
while (f.good() && s.find("</CellData>") != 0) {
f.getline(line, 256);
s = line;
if (s.find("<DataArray") == 0) {
numCellData++;
CPPUNIT_ASSERT_EQUAL(numCells, getDataArrayLength(f));
}
}
}
}
CPPUNIT_ASSERT(pointsFound);
CPPUNIT_ASSERT(cellsFound);
CPPUNIT_ASSERT(numPointData>0);
CPPUNIT_ASSERT(numCellData>0);
}
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