File: testjpeg2kimage.py

package info (click to toggle)
python-fabio 0.8.0%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 2,116 kB
  • sloc: python: 15,111; ansic: 1,091; sh: 233; makefile: 200
file content (178 lines) | stat: -rw-r--r-- 5,220 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
#    Project: Fable Input Output
#             https://github.com/silx-kit/fabio
#
#    Copyright (C) European Synchrotron Radiation Facility, Grenoble, France
#
#    Principal author:       Jérôme Kieffer (Jerome.Kieffer@ESRF.eu)
#
#    This program is free software: you can redistribute it and/or modify
#    it under the terms of the GNU General Public License as published by
#    the Free Software Foundation, either version 3 of the License, or
#    (at your option) any later version.
#
#    This program is distributed in the hope that it will be useful,
#    but WITHOUT ANY WARRANTY; without even the implied warranty of
#    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#    GNU General Public License for more details.
#
#    You should have received a copy of the GNU General Public License
#    along with this program.  If not, see <http://www.gnu.org/licenses/>.
#
"""
Test JPEG 2000 format
"""

from __future__ import print_function, with_statement, division, absolute_import

import unittest
import numpy
import logging
try:
    from PIL import Image
except ImportError:
    Image = None

logger = logging.getLogger(__name__)

import fabio
from .. import jpeg2kimage
from .utilstest import UtilsTest


def isPilUsable():
    if jpeg2kimage.PIL is None:
        return False
    try:
        if hasattr(jpeg2kimage.PIL.Image, "frombytes"):
            frombytes = jpeg2kimage.PIL.Image.frombytes
        else:
            frombytes = jpeg2kimage.PIL.Image.frombuffer
        frombytes("1", (2, 2), b"", decoder_name='jpeg2k')
    except Exception as e:
        if e.args[0] == "decoder jpeg2k not available":
            return False
        # Skip decoding error
    return True


def isGlymurUsable():
    if jpeg2kimage.glymur is None:
        return False
    import glymur
    if glymur.version.openjpeg_version_tuple < [1, 5, 0]:
        return False
    return True


class TestJpeg2KImage(unittest.TestCase):
    """Test the class format"""

    def setUp(self):
        if not isPilUsable() and not isGlymurUsable():
            self.skipTest("PIL nor glymur are available")

    def loadImage(self, filename):
        image_format = jpeg2kimage.Jpeg2KImage()
        image = image_format.read(filename)
        return image

    def test_open_uint8(self):
        filename = "binned_data_uint8.jp2"
        filename = UtilsTest.getimage(filename + ".bz2")[:-4]
        image = self.loadImage(filename)
        self.assertEqual(image.data.shape, (120, 120))
        self.assertEqual(image.data.dtype, numpy.uint8)

    def test_open_uint16(self):
        filename = "binned_data_uint16.jp2"
        filename = UtilsTest.getimage(filename + ".bz2")[:-4]
        image_format = jpeg2kimage.Jpeg2KImage()
        image = image_format.read(filename)
        self.assertEqual(image.data.shape, (120, 120))
        self.assertEqual(image.data.dtype, numpy.uint16)

    def test_open_wrong_format(self):
        filename = "MultiFrame.edf"
        filename = UtilsTest.getimage(filename + ".bz2")[:-4]
        image_format = jpeg2kimage.Jpeg2KImage()
        try:
            _image = image_format.read(filename)
            self.fail()
        except IOError:
            pass

    def test_open_missing_file(self):
        filename = "___missing_file___.___"
        image_format = jpeg2kimage.Jpeg2KImage()
        try:
            _image = image_format.read(filename)
            self.fail()
        except IOError:
            pass


class TestJpeg2KImage_PIL(TestJpeg2KImage):
    """Test the class format using a specific decoder"""

    def setUp(self):
        if not isPilUsable() and not isGlymurUsable():
            self.skipTest("PIL is not available")

    @classmethod
    def setUpClass(cls):
        # Remove other decoders
        cls.old = jpeg2kimage.glymur
        jpeg2kimage.glymur = None

    @classmethod
    def tearDownClass(cls):
        # Remove other decoders
        jpeg2kimage.glymur = cls.old
        cls.old = None


class TestJpeg2KImage_glymur(TestJpeg2KImage):
    """Test the class format using a specific decoder"""

    def setUp(self):
        if not isGlymurUsable():
            self.skipTest("glymur is not available")

    @classmethod
    def setUpClass(cls):
        # Remove other decoders
        cls.old = jpeg2kimage.PIL
        jpeg2kimage.PIL = None

    @classmethod
    def tearDownClass(cls):
        # Remove other decoders
        jpeg2kimage.PIL = cls.old
        cls.old = None


class TestJpeg2KImage_fabio(TestJpeg2KImage):
    """Test the format inside the fabio framework"""

    def loadImage(self, filename):
        """Use the fabio API instead of using the image format"""
        image = fabio.open(filename)
        return image


def suite():
    loader = unittest.defaultTestLoader.loadTestsFromTestCase
    testsuite = unittest.TestSuite()
    testsuite.addTest(loader(TestJpeg2KImage))
    testsuite.addTest(loader(TestJpeg2KImage_PIL))
    testsuite.addTest(loader(TestJpeg2KImage_glymur))
    testsuite.addTest(loader(TestJpeg2KImage_fabio))
    return testsuite


if __name__ == '__main__':
    runner = unittest.TextTestRunner()
    runner.run(suite())