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import json
import os
import shutil
import tempfile
import numpy as np
import pandas as pd
import fiona
from pyproj.exceptions import CRSError
from shapely.geometry import Point
import geopandas
from geopandas import GeoDataFrame, GeoSeries, read_file
from geopandas.array import GeometryArray, GeometryDtype, from_shapely
from geopandas.testing import assert_geodataframe_equal, assert_geoseries_equal
from geopandas.tests.util import PACKAGE_DIR, validate_boro_df
from pandas.testing import assert_frame_equal, assert_index_equal, assert_series_equal
import pytest
class TestDataFrame:
def setup_method(self):
N = 10
nybb_filename = geopandas.datasets.get_path("nybb")
self.df = read_file(nybb_filename)
self.tempdir = tempfile.mkdtemp()
self.crs = "epsg:4326"
self.df2 = GeoDataFrame(
[
{"geometry": Point(x, y), "value1": x + y, "value2": x * y}
for x, y in zip(range(N), range(N))
],
crs=self.crs,
)
self.df3 = read_file(os.path.join(PACKAGE_DIR, "examples", "null_geom.geojson"))
def teardown_method(self):
shutil.rmtree(self.tempdir)
def test_df_init(self):
assert type(self.df2) is GeoDataFrame
assert self.df2.crs == self.crs
def test_different_geo_colname(self):
data = {
"A": range(5),
"B": range(-5, 0),
"location": [Point(x, y) for x, y in zip(range(5), range(5))],
}
df = GeoDataFrame(data, crs=self.crs, geometry="location")
locs = GeoSeries(data["location"], crs=self.crs)
assert_geoseries_equal(df.geometry, locs)
assert "geometry" not in df
assert df.geometry.name == "location"
# internal implementation detail
assert df._geometry_column_name == "location"
geom2 = [Point(x, y) for x, y in zip(range(5, 10), range(5))]
with pytest.raises(CRSError):
df.set_geometry(geom2, crs="dummy_crs")
@pytest.mark.filterwarnings("ignore:Geometry is in a geographic CRS")
def test_geo_getitem(self):
data = {
"A": range(5),
"B": range(-5, 0),
"location": [Point(x, y) for x, y in zip(range(5), range(5))],
}
df = GeoDataFrame(data, crs=self.crs, geometry="location")
assert isinstance(df.geometry, GeoSeries)
df["geometry"] = df["A"]
assert isinstance(df.geometry, GeoSeries)
assert df.geometry[0] == data["location"][0]
# good if this changed in the future
assert not isinstance(df["geometry"], GeoSeries)
assert isinstance(df["location"], GeoSeries)
df["buff"] = df.buffer(1)
assert isinstance(df["buff"], GeoSeries)
df["array"] = from_shapely([Point(x, y) for x, y in zip(range(5), range(5))])
assert isinstance(df["array"], GeoSeries)
data["geometry"] = [Point(x + 1, y - 1) for x, y in zip(range(5), range(5))]
df = GeoDataFrame(data, crs=self.crs)
assert isinstance(df.geometry, GeoSeries)
assert isinstance(df["geometry"], GeoSeries)
# good if this changed in the future
assert not isinstance(df["location"], GeoSeries)
def test_getitem_no_geometry(self):
res = self.df2[["value1", "value2"]]
assert isinstance(res, pd.DataFrame)
assert not isinstance(res, GeoDataFrame)
# with different name
df = self.df2.copy()
df = df.rename(columns={"geometry": "geom"}).set_geometry("geom")
assert isinstance(df, GeoDataFrame)
res = df[["value1", "value2"]]
assert isinstance(res, pd.DataFrame)
assert not isinstance(res, GeoDataFrame)
df["geometry"] = np.arange(len(df))
res = df[["value1", "value2", "geometry"]]
assert isinstance(res, pd.DataFrame)
assert not isinstance(res, GeoDataFrame)
def test_geo_setitem(self):
data = {
"A": range(5),
"B": np.arange(5.0),
"geometry": [Point(x, y) for x, y in zip(range(5), range(5))],
}
df = GeoDataFrame(data)
s = GeoSeries([Point(x, y + 1) for x, y in zip(range(5), range(5))])
# setting geometry column
for vals in [s, s.values]:
df["geometry"] = vals
assert_geoseries_equal(df["geometry"], s)
assert_geoseries_equal(df.geometry, s)
# non-aligned values
s2 = GeoSeries([Point(x, y + 1) for x, y in zip(range(6), range(6))])
df["geometry"] = s2
assert_geoseries_equal(df["geometry"], s)
assert_geoseries_equal(df.geometry, s)
# setting other column with geometry values -> preserve geometry type
for vals in [s, s.values]:
df["other_geom"] = vals
assert isinstance(df["other_geom"].values, GeometryArray)
# overwriting existing non-geometry column -> preserve geometry type
data = {
"A": range(5),
"B": np.arange(5.0),
"other_geom": range(5),
"geometry": [Point(x, y) for x, y in zip(range(5), range(5))],
}
df = GeoDataFrame(data)
for vals in [s, s.values]:
df["other_geom"] = vals
assert isinstance(df["other_geom"].values, GeometryArray)
def test_geometry_property(self):
assert_geoseries_equal(
self.df.geometry,
self.df["geometry"],
check_dtype=True,
check_index_type=True,
)
df = self.df.copy()
new_geom = [
Point(x, y) for x, y in zip(range(len(self.df)), range(len(self.df)))
]
df.geometry = new_geom
new_geom = GeoSeries(new_geom, index=df.index, crs=df.crs)
assert_geoseries_equal(df.geometry, new_geom)
assert_geoseries_equal(df["geometry"], new_geom)
# new crs
gs = new_geom.to_crs(crs="epsg:3857")
df.geometry = gs
assert df.crs == "epsg:3857"
def test_geometry_property_errors(self):
with pytest.raises(AttributeError):
df = self.df.copy()
del df["geometry"]
df.geometry
# list-like error
with pytest.raises(ValueError):
df = self.df2.copy()
df.geometry = "value1"
# list-like error
with pytest.raises(ValueError):
df = self.df.copy()
df.geometry = "apple"
# non-geometry error
with pytest.raises(TypeError):
df = self.df.copy()
df.geometry = list(range(df.shape[0]))
with pytest.raises(KeyError):
df = self.df.copy()
del df["geometry"]
df["geometry"]
# ndim error
with pytest.raises(ValueError):
df = self.df.copy()
df.geometry = df
def test_rename_geometry(self):
assert self.df.geometry.name == "geometry"
df2 = self.df.rename_geometry("new_name")
assert df2.geometry.name == "new_name"
df2 = self.df.rename_geometry("new_name", inplace=True)
assert df2 is None
assert self.df.geometry.name == "new_name"
def test_set_geometry(self):
geom = GeoSeries([Point(x, y) for x, y in zip(range(5), range(5))])
original_geom = self.df.geometry
df2 = self.df.set_geometry(geom)
assert self.df is not df2
assert_geoseries_equal(df2.geometry, geom, check_crs=False)
assert_geoseries_equal(self.df.geometry, original_geom)
assert_geoseries_equal(self.df["geometry"], self.df.geometry)
# unknown column
with pytest.raises(ValueError):
self.df.set_geometry("nonexistent-column")
# ndim error
with pytest.raises(ValueError):
self.df.set_geometry(self.df)
# new crs - setting should default to GeoSeries' crs
gs = GeoSeries(geom, crs="epsg:3857")
new_df = self.df.set_geometry(gs)
assert new_df.crs == "epsg:3857"
# explicit crs overrides self and dataframe
new_df = self.df.set_geometry(gs, crs="epsg:26909")
assert new_df.crs == "epsg:26909"
assert new_df.geometry.crs == "epsg:26909"
# Series should use dataframe's
new_df = self.df.set_geometry(geom.values)
assert new_df.crs == self.df.crs
assert new_df.geometry.crs == self.df.crs
def test_set_geometry_col(self):
g = self.df.geometry
g_simplified = g.simplify(100)
self.df["simplified_geometry"] = g_simplified
df2 = self.df.set_geometry("simplified_geometry")
# Drop is false by default
assert "simplified_geometry" in df2
assert_geoseries_equal(df2.geometry, g_simplified)
# If True, drops column and renames to geometry
df3 = self.df.set_geometry("simplified_geometry", drop=True)
assert "simplified_geometry" not in df3
assert_geoseries_equal(df3.geometry, g_simplified)
def test_set_geometry_inplace(self):
geom = [Point(x, y) for x, y in zip(range(5), range(5))]
ret = self.df.set_geometry(geom, inplace=True)
assert ret is None
geom = GeoSeries(geom, index=self.df.index, crs=self.df.crs)
assert_geoseries_equal(self.df.geometry, geom)
def test_set_geometry_series(self):
# Test when setting geometry with a Series that
# alignment will occur
#
# Reverse the index order
# Set the Series to be Point(i,i) where i is the index
self.df.index = range(len(self.df) - 1, -1, -1)
d = {}
for i in range(len(self.df)):
d[i] = Point(i, i)
g = GeoSeries(d)
# At this point, the DataFrame index is [4,3,2,1,0] and the
# GeoSeries index is [0,1,2,3,4]. Make sure set_geometry aligns
# them to match indexes
df = self.df.set_geometry(g)
for i, r in df.iterrows():
assert i == r["geometry"].x
assert i == r["geometry"].y
def test_set_geometry_empty(self):
df = pd.DataFrame(columns=["a", "geometry"], index=pd.DatetimeIndex([]))
result = df.set_geometry("geometry")
assert isinstance(result, GeoDataFrame)
assert isinstance(result.index, pd.DatetimeIndex)
def test_align(self):
df = self.df2
res1, res2 = df.align(df)
assert_geodataframe_equal(res1, df)
assert_geodataframe_equal(res2, df)
res1, res2 = df.align(df.copy())
assert_geodataframe_equal(res1, df)
assert_geodataframe_equal(res2, df)
# assert crs is / is not preserved on mixed dataframes
df_nocrs = df.copy()
df_nocrs.crs = None
res1, res2 = df.align(df_nocrs)
assert_geodataframe_equal(res1, df)
assert res1.crs is not None
assert_geodataframe_equal(res2, df_nocrs)
assert res2.crs is None
# mixed GeoDataFrame / DataFrame
df_nogeom = pd.DataFrame(df.drop("geometry", axis=1))
res1, res2 = df.align(df_nogeom, axis=0)
assert_geodataframe_equal(res1, df)
assert type(res2) == pd.DataFrame
assert_frame_equal(res2, df_nogeom)
# same as above but now with actual alignment
df1 = df.iloc[1:].copy()
df2 = df.iloc[:-1].copy()
exp1 = df.copy()
exp1.iloc[0] = np.nan
exp2 = df.copy()
exp2.iloc[-1] = np.nan
res1, res2 = df1.align(df2)
assert_geodataframe_equal(res1, exp1)
assert_geodataframe_equal(res2, exp2)
df2_nocrs = df2.copy()
df2_nocrs.crs = None
exp2_nocrs = exp2.copy()
exp2_nocrs.crs = None
res1, res2 = df1.align(df2_nocrs)
assert_geodataframe_equal(res1, exp1)
assert res1.crs is not None
assert_geodataframe_equal(res2, exp2_nocrs)
assert res2.crs is None
df2_nogeom = pd.DataFrame(df2.drop("geometry", axis=1))
exp2_nogeom = pd.DataFrame(exp2.drop("geometry", axis=1))
res1, res2 = df1.align(df2_nogeom, axis=0)
assert_geodataframe_equal(res1, exp1)
assert type(res2) == pd.DataFrame
assert_frame_equal(res2, exp2_nogeom)
def test_to_json(self):
text = self.df.to_json()
data = json.loads(text)
assert data["type"] == "FeatureCollection"
assert len(data["features"]) == 5
def test_to_json_geom_col(self):
df = self.df.copy()
df["geom"] = df["geometry"]
df["geometry"] = np.arange(len(df))
df.set_geometry("geom", inplace=True)
text = df.to_json()
data = json.loads(text)
assert data["type"] == "FeatureCollection"
assert len(data["features"]) == 5
def test_to_json_na(self):
# Set a value as nan and make sure it's written
self.df.loc[self.df["BoroName"] == "Queens", "Shape_Area"] = np.nan
text = self.df.to_json()
data = json.loads(text)
assert len(data["features"]) == 5
for f in data["features"]:
props = f["properties"]
assert len(props) == 4
if props["BoroName"] == "Queens":
assert props["Shape_Area"] is None
def test_to_json_bad_na(self):
# Check that a bad na argument raises error
with pytest.raises(ValueError):
self.df.to_json(na="garbage")
def test_to_json_dropna(self):
self.df.loc[self.df["BoroName"] == "Queens", "Shape_Area"] = np.nan
self.df.loc[self.df["BoroName"] == "Bronx", "Shape_Leng"] = np.nan
text = self.df.to_json(na="drop")
data = json.loads(text)
assert len(data["features"]) == 5
for f in data["features"]:
props = f["properties"]
if props["BoroName"] == "Queens":
assert len(props) == 3
assert "Shape_Area" not in props
# Just make sure setting it to nan in a different row
# doesn't affect this one
assert "Shape_Leng" in props
elif props["BoroName"] == "Bronx":
assert len(props) == 3
assert "Shape_Leng" not in props
assert "Shape_Area" in props
else:
assert len(props) == 4
def test_to_json_keepna(self):
self.df.loc[self.df["BoroName"] == "Queens", "Shape_Area"] = np.nan
self.df.loc[self.df["BoroName"] == "Bronx", "Shape_Leng"] = np.nan
text = self.df.to_json(na="keep")
data = json.loads(text)
assert len(data["features"]) == 5
for f in data["features"]:
props = f["properties"]
assert len(props) == 4
if props["BoroName"] == "Queens":
assert np.isnan(props["Shape_Area"])
# Just make sure setting it to nan in a different row
# doesn't affect this one
assert "Shape_Leng" in props
elif props["BoroName"] == "Bronx":
assert np.isnan(props["Shape_Leng"])
assert "Shape_Area" in props
def test_copy(self):
df2 = self.df.copy()
assert type(df2) is GeoDataFrame
assert self.df.crs == df2.crs
def test_to_file_crs(self):
"""
Ensure that the file is written according to the crs
if it is specified
"""
tempfilename = os.path.join(self.tempdir, "crs.shp")
# save correct CRS
self.df.to_file(tempfilename)
df = GeoDataFrame.from_file(tempfilename)
assert df.crs == self.df.crs
# overwrite CRS
self.df.to_file(tempfilename, crs=3857)
df = GeoDataFrame.from_file(tempfilename)
assert df.crs == "epsg:3857"
# specify CRS for gdf without one
df2 = self.df.copy()
df2.crs = None
df2.to_file(tempfilename, crs=2263)
df = GeoDataFrame.from_file(tempfilename)
assert df.crs == "epsg:2263"
def test_bool_index(self):
# Find boros with 'B' in their name
df = self.df[self.df["BoroName"].str.contains("B")]
assert len(df) == 2
boros = df["BoroName"].values
assert "Brooklyn" in boros
assert "Bronx" in boros
assert type(df) is GeoDataFrame
def test_coord_slice_points(self):
assert self.df2.cx[-2:-1, -2:-1].empty
assert_frame_equal(self.df2, self.df2.cx[:, :])
assert_frame_equal(self.df2.loc[5:], self.df2.cx[5:, :])
assert_frame_equal(self.df2.loc[5:], self.df2.cx[:, 5:])
assert_frame_equal(self.df2.loc[5:], self.df2.cx[5:, 5:])
def test_from_features(self):
nybb_filename = geopandas.datasets.get_path("nybb")
with fiona.open(nybb_filename) as f:
features = list(f)
crs = f.crs_wkt
df = GeoDataFrame.from_features(features, crs=crs)
validate_boro_df(df, case_sensitive=True)
assert df.crs == crs
def test_from_features_unaligned_properties(self):
p1 = Point(1, 1)
f1 = {
"type": "Feature",
"properties": {"a": 0},
"geometry": p1.__geo_interface__,
}
p2 = Point(2, 2)
f2 = {
"type": "Feature",
"properties": {"b": 1},
"geometry": p2.__geo_interface__,
}
p3 = Point(3, 3)
f3 = {
"type": "Feature",
"properties": {"a": 2},
"geometry": p3.__geo_interface__,
}
df = GeoDataFrame.from_features([f1, f2, f3])
result = df[["a", "b"]]
expected = pd.DataFrame.from_dict(
[{"a": 0, "b": np.nan}, {"a": np.nan, "b": 1}, {"a": 2, "b": np.nan}]
)
assert_frame_equal(expected, result)
def test_from_features_geom_interface_feature(self):
class Placemark(object):
def __init__(self, geom, val):
self.__geo_interface__ = {
"type": "Feature",
"properties": {"a": val},
"geometry": geom.__geo_interface__,
}
p1 = Point(1, 1)
f1 = Placemark(p1, 0)
p2 = Point(3, 3)
f2 = Placemark(p2, 0)
df = GeoDataFrame.from_features([f1, f2])
assert sorted(df.columns) == ["a", "geometry"]
assert df.geometry.tolist() == [p1, p2]
def test_from_feature_collection(self):
data = {
"name": ["a", "b", "c"],
"lat": [45, 46, 47.5],
"lon": [-120, -121.2, -122.9],
}
df = pd.DataFrame(data)
geometry = [Point(xy) for xy in zip(df["lon"], df["lat"])]
gdf = GeoDataFrame(df, geometry=geometry)
# from_features returns sorted columns
expected = gdf[["geometry", "lat", "lon", "name"]]
# test FeatureCollection
res = GeoDataFrame.from_features(gdf.__geo_interface__)
assert_frame_equal(res, expected)
# test list of Features
res = GeoDataFrame.from_features(gdf.__geo_interface__["features"])
assert_frame_equal(res, expected)
# test __geo_interface__ attribute (a GeoDataFrame has one)
res = GeoDataFrame.from_features(gdf)
assert_frame_equal(res, expected)
def test_dataframe_to_geodataframe(self):
df = pd.DataFrame(
{"A": range(len(self.df)), "location": list(self.df.geometry)},
index=self.df.index,
)
gf = df.set_geometry("location", crs=self.df.crs)
assert isinstance(df, pd.DataFrame)
assert isinstance(gf, GeoDataFrame)
assert_geoseries_equal(gf.geometry, self.df.geometry)
assert gf.geometry.name == "location"
assert "geometry" not in gf
gf2 = df.set_geometry("location", crs=self.df.crs, drop=True)
assert isinstance(df, pd.DataFrame)
assert isinstance(gf2, GeoDataFrame)
assert gf2.geometry.name == "geometry"
assert "geometry" in gf2
assert "location" not in gf2
assert "location" in df
# should be a copy
df.loc[0, "A"] = 100
assert gf.loc[0, "A"] == 0
assert gf2.loc[0, "A"] == 0
with pytest.raises(ValueError):
df.set_geometry("location", inplace=True)
def test_geodataframe_geointerface(self):
assert self.df.__geo_interface__["type"] == "FeatureCollection"
assert len(self.df.__geo_interface__["features"]) == self.df.shape[0]
def test_geodataframe_iterfeatures(self):
df = self.df.iloc[:1].copy()
df.loc[0, "BoroName"] = np.nan
# when containing missing values
# null: ouput the missing entries as JSON null
result = list(df.iterfeatures(na="null"))[0]["properties"]
assert result["BoroName"] is None
# drop: remove the property from the feature.
result = list(df.iterfeatures(na="drop"))[0]["properties"]
assert "BoroName" not in result.keys()
# keep: output the missing entries as NaN
result = list(df.iterfeatures(na="keep"))[0]["properties"]
assert np.isnan(result["BoroName"])
# test for checking that the (non-null) features are python scalars and
# not numpy scalars
assert type(df.loc[0, "Shape_Leng"]) is np.float64
# null
result = list(df.iterfeatures(na="null"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# drop
result = list(df.iterfeatures(na="drop"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# keep
result = list(df.iterfeatures(na="keep"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# when only having numerical columns
df_only_numerical_cols = df[["Shape_Leng", "Shape_Area", "geometry"]]
assert type(df_only_numerical_cols.loc[0, "Shape_Leng"]) is np.float64
# null
result = list(df_only_numerical_cols.iterfeatures(na="null"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# drop
result = list(df_only_numerical_cols.iterfeatures(na="drop"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# keep
result = list(df_only_numerical_cols.iterfeatures(na="keep"))[0]
assert type(result["properties"]["Shape_Leng"]) is float
# geometry not set
df = GeoDataFrame({"values": [0, 1], "geom": [Point(0, 1), Point(1, 0)]})
with pytest.raises(AttributeError):
list(df.iterfeatures())
def test_geodataframe_geojson_no_bbox(self):
geo = self.df._to_geo(na="null", show_bbox=False)
assert "bbox" not in geo.keys()
for feature in geo["features"]:
assert "bbox" not in feature.keys()
def test_geodataframe_geojson_bbox(self):
geo = self.df._to_geo(na="null", show_bbox=True)
assert "bbox" in geo.keys()
assert len(geo["bbox"]) == 4
assert isinstance(geo["bbox"], tuple)
for feature in geo["features"]:
assert "bbox" in feature.keys()
def test_pickle(self):
import pickle
df2 = pickle.loads(pickle.dumps(self.df))
assert_geodataframe_equal(self.df, df2)
def test_pickle_method(self):
filename = os.path.join(self.tempdir, "df.pkl")
self.df.to_pickle(filename)
unpickled = pd.read_pickle(filename)
assert_frame_equal(self.df, unpickled)
assert self.df.crs == unpickled.crs
def check_geodataframe(df, geometry_column="geometry"):
assert isinstance(df, GeoDataFrame)
assert isinstance(df.geometry, GeoSeries)
assert isinstance(df[geometry_column], GeoSeries)
assert df._geometry_column_name == geometry_column
assert df.geometry.name == geometry_column
assert isinstance(df.geometry.values, GeometryArray)
assert isinstance(df.geometry.dtype, GeometryDtype)
class TestConstructor:
def test_dict(self):
data = {
"A": range(3),
"B": np.arange(3.0),
"geometry": [Point(x, x) for x in range(3)],
}
df = GeoDataFrame(data)
check_geodataframe(df)
# with specifying other kwargs
df = GeoDataFrame(data, index=list("abc"))
check_geodataframe(df)
assert_index_equal(df.index, pd.Index(list("abc")))
df = GeoDataFrame(data, columns=["B", "A", "geometry"])
check_geodataframe(df)
assert_index_equal(df.columns, pd.Index(["B", "A", "geometry"]))
df = GeoDataFrame(data, columns=["A", "geometry"])
check_geodataframe(df)
assert_index_equal(df.columns, pd.Index(["A", "geometry"]))
assert_series_equal(df["A"], pd.Series(range(3), name="A"))
def test_dict_of_series(self):
data = {
"A": pd.Series(range(3)),
"B": pd.Series(np.arange(3.0)),
"geometry": GeoSeries([Point(x, x) for x in range(3)]),
}
df = GeoDataFrame(data)
check_geodataframe(df)
df = GeoDataFrame(data, index=pd.Index([1, 2]))
check_geodataframe(df)
assert_index_equal(df.index, pd.Index([1, 2]))
assert df["A"].tolist() == [1, 2]
# one non-series -> length is not correct
data = {
"A": pd.Series(range(3)),
"B": np.arange(3.0),
"geometry": GeoSeries([Point(x, x) for x in range(3)]),
}
with pytest.raises(ValueError):
GeoDataFrame(data, index=[1, 2])
def test_dict_specified_geometry(self):
data = {
"A": range(3),
"B": np.arange(3.0),
"other_geom": [Point(x, x) for x in range(3)],
}
df = GeoDataFrame(data, geometry="other_geom")
check_geodataframe(df, "other_geom")
with pytest.raises(ValueError):
df = GeoDataFrame(data, geometry="geometry")
# when no geometry specified -> works but raises error once
# trying to access geometry
df = GeoDataFrame(data)
with pytest.raises(AttributeError):
_ = df.geometry
df = df.set_geometry("other_geom")
check_geodataframe(df, "other_geom")
# combined with custom args
df = GeoDataFrame(data, geometry="other_geom", columns=["B", "other_geom"])
check_geodataframe(df, "other_geom")
assert_index_equal(df.columns, pd.Index(["B", "other_geom"]))
assert_series_equal(df["B"], pd.Series(np.arange(3.0), name="B"))
df = GeoDataFrame(data, geometry="other_geom", columns=["other_geom", "A"])
check_geodataframe(df, "other_geom")
assert_index_equal(df.columns, pd.Index(["other_geom", "A"]))
assert_series_equal(df["A"], pd.Series(range(3), name="A"))
def test_array(self):
data = {
"A": range(3),
"B": np.arange(3.0),
"geometry": [Point(x, x) for x in range(3)],
}
a = np.array([data["A"], data["B"], data["geometry"]], dtype=object).T
df = GeoDataFrame(a, columns=["A", "B", "geometry"])
check_geodataframe(df)
df = GeoDataFrame(a, columns=["A", "B", "other_geom"], geometry="other_geom")
check_geodataframe(df, "other_geom")
def test_from_frame(self):
data = {
"A": range(3),
"B": np.arange(3.0),
"geometry": [Point(x, x) for x in range(3)],
}
gpdf = GeoDataFrame(data)
pddf = pd.DataFrame(data)
check_geodataframe(gpdf)
assert type(pddf) == pd.DataFrame
for df in [gpdf, pddf]:
res = GeoDataFrame(df)
check_geodataframe(res)
res = GeoDataFrame(df, index=pd.Index([0, 2]))
check_geodataframe(res)
assert_index_equal(res.index, pd.Index([0, 2]))
assert res["A"].tolist() == [0, 2]
res = GeoDataFrame(df, columns=["geometry", "B"])
check_geodataframe(res)
assert_index_equal(res.columns, pd.Index(["geometry", "B"]))
with pytest.raises(ValueError):
GeoDataFrame(df, geometry="other_geom")
def test_from_frame_specified_geometry(self):
data = {
"A": range(3),
"B": np.arange(3.0),
"other_geom": [Point(x, x) for x in range(3)],
}
gpdf = GeoDataFrame(data, geometry="other_geom")
check_geodataframe(gpdf, "other_geom")
pddf = pd.DataFrame(data)
for df in [gpdf, pddf]:
res = GeoDataFrame(df, geometry="other_geom")
check_geodataframe(res, "other_geom")
# when passing GeoDataFrame with custom geometry name to constructor
# an invalid geodataframe is the result TODO is this desired ?
df = GeoDataFrame(gpdf)
with pytest.raises(AttributeError):
df.geometry
def test_only_geometry(self):
exp = GeoDataFrame(
{"geometry": [Point(x, x) for x in range(3)], "other": range(3)}
)[["geometry"]]
df = GeoDataFrame(geometry=[Point(x, x) for x in range(3)])
check_geodataframe(df)
assert_geodataframe_equal(df, exp)
df = GeoDataFrame({"geometry": [Point(x, x) for x in range(3)]})
check_geodataframe(df)
assert_geodataframe_equal(df, exp)
df = GeoDataFrame(
{"other_geom": [Point(x, x) for x in range(3)]}, geometry="other_geom"
)
check_geodataframe(df, "other_geom")
exp = exp.rename(columns={"geometry": "other_geom"}).set_geometry("other_geom")
assert_geodataframe_equal(df, exp)
def test_no_geometries(self):
# keeps GeoDataFrame class (no DataFrame)
data = {"A": range(3), "B": np.arange(3.0)}
df = GeoDataFrame(data)
assert type(df) == GeoDataFrame
gdf = GeoDataFrame({"x": [1]})
assert list(gdf.x) == [1]
def test_empty(self):
df = GeoDataFrame()
assert type(df) == GeoDataFrame
df = GeoDataFrame({"A": [], "B": []}, geometry=[])
assert type(df) == GeoDataFrame
def test_column_ordering(self):
geoms = [Point(1, 1), Point(2, 2), Point(3, 3)]
gs = GeoSeries(geoms)
gdf = GeoDataFrame(
{"a": [1, 2, 3], "geometry": gs},
columns=["geometry", "a"],
geometry="geometry",
)
check_geodataframe(gdf)
gdf.columns == ["geometry", "a"]
# with non-default index
gdf = GeoDataFrame(
{"a": [1, 2, 3], "geometry": gs},
columns=["geometry", "a"],
index=pd.Index([0, 0, 1]),
geometry="geometry",
)
check_geodataframe(gdf)
gdf.columns == ["geometry", "a"]
@pytest.mark.xfail
def test_preserve_series_name(self):
geoms = [Point(1, 1), Point(2, 2), Point(3, 3)]
gs = GeoSeries(geoms)
gdf = GeoDataFrame({"a": [1, 2, 3]}, geometry=gs)
check_geodataframe(gdf, geometry_column="geometry")
geoms = [Point(1, 1), Point(2, 2), Point(3, 3)]
gs = GeoSeries(geoms, name="my_geom")
gdf = GeoDataFrame({"a": [1, 2, 3]}, geometry=gs)
check_geodataframe(gdf, geometry_column="my_geom")
def test_overwrite_geometry(self):
# GH602
data = pd.DataFrame({"geometry": [1, 2, 3], "col1": [4, 5, 6]})
geoms = pd.Series([Point(i, i) for i in range(3)])
# passed geometry kwarg should overwrite geometry column in data
res = GeoDataFrame(data, geometry=geoms)
assert_geoseries_equal(res.geometry, GeoSeries(geoms))
def test_geodataframe_crs():
gdf = GeoDataFrame()
gdf.crs = "IGNF:ETRS89UTM28"
assert gdf.crs.to_authority() == ("IGNF", "ETRS89UTM28")
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