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import json
import os
import random
import shutil
import tempfile
import numpy as np
from numpy.testing import assert_array_equal
import pandas as pd
from shapely.geometry import (
LineString,
MultiLineString,
MultiPoint,
MultiPolygon,
Point,
Polygon,
)
from shapely.geometry.base import BaseGeometry
from geopandas import GeoSeries, GeoDataFrame
from geopandas.array import GeometryArray, GeometryDtype
from geopandas.tests.util import geom_equals
from pandas.testing import assert_series_equal
import pytest
class TestSeries:
def setup_method(self):
self.tempdir = tempfile.mkdtemp()
self.t1 = Polygon([(0, 0), (1, 0), (1, 1)])
self.t2 = Polygon([(0, 0), (1, 1), (0, 1)])
self.sq = Polygon([(0, 0), (1, 0), (1, 1), (0, 1)])
self.g1 = GeoSeries([self.t1, self.sq])
self.g2 = GeoSeries([self.sq, self.t1])
self.g3 = GeoSeries([self.t1, self.t2])
self.g3.crs = "epsg:4326"
self.g4 = GeoSeries([self.t2, self.t1])
self.na = GeoSeries([self.t1, self.t2, Polygon()])
self.na_none = GeoSeries([self.t1, self.t2, None])
self.a1 = self.g1.copy()
self.a1.index = ["A", "B"]
self.a2 = self.g2.copy()
self.a2.index = ["B", "C"]
self.esb = Point(-73.9847, 40.7484)
self.sol = Point(-74.0446, 40.6893)
self.landmarks = GeoSeries([self.esb, self.sol], crs="epsg:4326")
self.l1 = LineString([(0, 0), (0, 1), (1, 1)])
self.l2 = LineString([(0, 0), (1, 0), (1, 1), (0, 1)])
self.g5 = GeoSeries([self.l1, self.l2])
def teardown_method(self):
shutil.rmtree(self.tempdir)
def test_copy(self):
gc = self.g3.copy()
assert type(gc) is GeoSeries
assert self.g3.name == gc.name
assert self.g3.crs == gc.crs
def test_in(self):
assert self.t1 in self.g1
assert self.sq in self.g1
assert self.t1 in self.a1
assert self.t2 in self.g3
assert self.sq not in self.g3
assert 5 not in self.g3
def test_align(self):
a1, a2 = self.a1.align(self.a2)
assert isinstance(a1, GeoSeries)
assert isinstance(a2, GeoSeries)
assert a2["A"] is None
assert a1["B"].equals(a2["B"])
assert a1["C"] is None
def test_align_crs(self):
a1 = self.a1
a1.crs = "epsg:4326"
a2 = self.a2
a2.crs = "epsg:31370"
res1, res2 = a1.align(a2)
assert res1.crs == "epsg:4326"
assert res2.crs == "epsg:31370"
a2.crs = None
res1, res2 = a1.align(a2)
assert res1.crs == "epsg:4326"
assert res2.crs is None
def test_align_mixed(self):
a1 = self.a1
s2 = pd.Series([1, 2], index=["B", "C"])
res1, res2 = a1.align(s2)
exp2 = pd.Series([np.nan, 1, 2], index=["A", "B", "C"])
assert_series_equal(res2, exp2)
def test_warning_if_not_aligned(self):
# GH-816
# Test that warning is issued when operating on non-aligned series
# _series_op
with pytest.warns(UserWarning, match="The indices .+ different"):
self.a1.contains(self.a2)
# _geo_op
with pytest.warns(UserWarning, match="The indices .+ different"):
self.a1.union(self.a2)
def test_no_warning_if_aligned(self):
# GH-816
# Test that warning is not issued when operating on aligned series
a1, a2 = self.a1.align(self.a2)
with pytest.warns(None) as warnings:
a1.contains(a2) # _series_op, explicitly aligned
self.g1.intersects(self.g2) # _series_op, implicitly aligned
a2.union(a1) # _geo_op, explicitly aligned
self.g2.intersection(self.g1) # _geo_op, implicitly aligned
user_warnings = [w for w in warnings if w.category is UserWarning]
assert not user_warnings, user_warnings[0].message
def test_geom_equals(self):
assert np.all(self.g1.geom_equals(self.g1))
assert_array_equal(self.g1.geom_equals(self.sq), [False, True])
def test_geom_equals_align(self):
with pytest.warns(UserWarning, match="The indices .+ different"):
a = self.a1.geom_equals(self.a2)
exp = pd.Series([False, True, False], index=["A", "B", "C"])
assert_series_equal(a, exp)
def test_geom_almost_equals(self):
# TODO: test decimal parameter
assert np.all(self.g1.geom_almost_equals(self.g1))
assert_array_equal(self.g1.geom_almost_equals(self.sq), [False, True])
def test_geom_equals_exact(self):
# TODO: test tolerance parameter
assert np.all(self.g1.geom_equals_exact(self.g1, 0.001))
assert_array_equal(self.g1.geom_equals_exact(self.sq, 0.001), [False, True])
def test_equal_comp_op(self):
s = GeoSeries([Point(x, x) for x in range(3)])
res = s == Point(1, 1)
exp = pd.Series([False, True, False])
assert_series_equal(res, exp)
def test_to_file(self):
""" Test to_file and from_file """
tempfilename = os.path.join(self.tempdir, "test.shp")
self.g3.to_file(tempfilename)
# Read layer back in?
s = GeoSeries.from_file(tempfilename)
assert all(self.g3.geom_equals(s))
# TODO: compare crs
def test_to_json(self):
"""
Test whether GeoSeries.to_json works and returns an actual json file.
"""
json_str = self.g3.to_json()
json.loads(json_str)
# TODO : verify the output is a valid GeoJSON.
def test_representative_point(self):
assert np.all(self.g1.contains(self.g1.representative_point()))
assert np.all(self.g2.contains(self.g2.representative_point()))
assert np.all(self.g3.contains(self.g3.representative_point()))
assert np.all(self.g4.contains(self.g4.representative_point()))
def test_transform(self):
utm18n = self.landmarks.to_crs(epsg=26918)
lonlat = utm18n.to_crs(epsg=4326)
assert np.all(self.landmarks.geom_almost_equals(lonlat))
with pytest.raises(ValueError):
self.g1.to_crs(epsg=4326)
with pytest.raises(ValueError):
self.landmarks.to_crs(crs=None, epsg=None)
def test_fillna(self):
# default is to fill with empty geometry
na = self.na_none.fillna()
assert isinstance(na[2], BaseGeometry)
assert na[2].is_empty
assert geom_equals(self.na_none[:2], na[:2])
# XXX: method works inconsistently for different pandas versions
# self.na_none.fillna(method='backfill')
def test_coord_slice(self):
""" Test CoordinateSlicer """
# need some better test cases
assert geom_equals(self.g3, self.g3.cx[:, :])
assert geom_equals(self.g3[[True, False]], self.g3.cx[0.9:, :0.1])
assert geom_equals(self.g3[[False, True]], self.g3.cx[0:0.1, 0.9:1.0])
def test_coord_slice_with_zero(self):
# Test that CoordinateSlice correctly handles zero slice (#GH477).
gs = GeoSeries([Point(x, x) for x in range(-3, 4)])
assert geom_equals(gs.cx[:0, :0], gs.loc[:3])
assert geom_equals(gs.cx[:, :0], gs.loc[:3])
assert geom_equals(gs.cx[:0, :], gs.loc[:3])
assert geom_equals(gs.cx[0:, 0:], gs.loc[3:])
assert geom_equals(gs.cx[0:, :], gs.loc[3:])
assert geom_equals(gs.cx[:, 0:], gs.loc[3:])
def test_geoseries_geointerface(self):
assert self.g1.__geo_interface__["type"] == "FeatureCollection"
assert len(self.g1.__geo_interface__["features"]) == self.g1.shape[0]
def test_proj4strings(self):
# As string
reprojected = self.g3.to_crs("+proj=utm +zone=30N")
reprojected_back = reprojected.to_crs(epsg=4326)
assert np.all(self.g3.geom_almost_equals(reprojected_back))
# As dict
reprojected = self.g3.to_crs({"proj": "utm", "zone": "30N"})
reprojected_back = reprojected.to_crs(epsg=4326)
assert np.all(self.g3.geom_almost_equals(reprojected_back))
# Set to equivalent string, convert, compare to original
copy = self.g3.copy()
copy.crs = "epsg:4326"
reprojected = copy.to_crs({"proj": "utm", "zone": "30N"})
reprojected_back = reprojected.to_crs(epsg=4326)
assert np.all(self.g3.geom_almost_equals(reprojected_back))
# Conversions by different format
reprojected_string = self.g3.to_crs("+proj=utm +zone=30N")
reprojected_dict = self.g3.to_crs({"proj": "utm", "zone": "30N"})
assert np.all(reprojected_string.geom_almost_equals(reprojected_dict))
def test_missing_values_empty_warning():
s = GeoSeries([Point(1, 1), None, np.nan, BaseGeometry(), Polygon()])
with pytest.warns(UserWarning):
s.isna()
with pytest.warns(UserWarning):
s.notna()
@pytest.mark.filterwarnings("ignore::UserWarning")
def test_missing_values():
s = GeoSeries([Point(1, 1), None, np.nan, BaseGeometry(), Polygon()])
# construction -> missing values get normalized to None
assert s[1] is None
assert s[2] is None
assert s[3].is_empty
assert s[4].is_empty
# isna / is_empty
assert s.isna().tolist() == [False, True, True, False, False]
assert s.is_empty.tolist() == [False, False, False, True, True]
assert s.notna().tolist() == [True, False, False, True, True]
# fillna defaults to fill with empty geometry -> no missing values anymore
assert not s.fillna().isna().any()
# dropna drops the missing values
assert not s.dropna().isna().any()
assert len(s.dropna()) == 3
def test_geoseries_crs():
gs = GeoSeries()
gs.crs = "IGNF:ETRS89UTM28"
assert gs.crs.to_authority() == ("IGNF", "ETRS89UTM28")
# -----------------------------------------------------------------------------
# # Constructor tests
# -----------------------------------------------------------------------------
def check_geoseries(s):
assert isinstance(s, GeoSeries)
assert isinstance(s.geometry, GeoSeries)
assert isinstance(s.dtype, GeometryDtype)
assert isinstance(s.values, GeometryArray)
class TestConstructor:
def test_constructor(self):
s = GeoSeries([Point(x, x) for x in range(3)])
check_geoseries(s)
def test_single_geom_constructor(self):
p = Point(1, 2)
line = LineString([(2, 3), (4, 5), (5, 6)])
poly = Polygon(
[(0, 0), (1, 0), (1, 1), (0, 1)], [[(0.1, 0.1), (0.9, 0.1), (0.9, 0.9)]]
)
mp = MultiPoint([(1, 2), (3, 4), (5, 6)])
mline = MultiLineString([[(1, 2), (3, 4), (5, 6)], [(7, 8), (9, 10)]])
poly2 = Polygon(
[(0, 0), (0, -1), (-1, -1), (-1, 0)],
[[(-0.1, -0.1), (-0.1, -0.5), (-0.5, -0.5), (-0.5, -0.1)]],
)
mpoly = MultiPolygon([poly, poly2])
geoms = [p, line, poly, mp, mline, mpoly]
index = ["a", "b", "c", "d"]
for g in geoms:
gs = GeoSeries(g)
assert len(gs) == 1
# accessing elements no longer give identical objects
assert gs.iloc[0].equals(g)
gs = GeoSeries(g, index=index)
assert len(gs) == len(index)
for x in gs:
assert x.equals(g)
def test_no_geometries_fallback(self):
with pytest.warns(FutureWarning):
s = GeoSeries([True, False, True])
assert not isinstance(s, GeoSeries)
assert type(s) == pd.Series
with pytest.warns(FutureWarning):
s = GeoSeries(["a", "b", "c"])
assert not isinstance(s, GeoSeries)
assert type(s) == pd.Series
with pytest.warns(FutureWarning):
s = GeoSeries([[1, 2], [3, 4]])
assert not isinstance(s, GeoSeries)
assert type(s) == pd.Series
def test_empty(self):
s = GeoSeries([])
check_geoseries(s)
s = GeoSeries()
check_geoseries(s)
def test_from_series(self):
shapes = [
Polygon([(random.random(), random.random()) for _ in range(3)])
for _ in range(10)
]
s = pd.Series(shapes, index=list("abcdefghij"), name="foo")
g = GeoSeries(s)
check_geoseries(g)
assert [a.equals(b) for a, b in zip(s, g)]
assert s.name == g.name
assert s.index is g.index
# GH 1216
def test_expanddim(self):
s = GeoSeries(
[MultiPoint([(0, 0), (1, 1)]), MultiPoint([(2, 2), (3, 3), (4, 4)])]
)
s = s.explode()
df = s.reset_index()
assert type(df) == GeoDataFrame
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