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import os
import numpy as np
import pandas as pd
from shapely import make_valid
from shapely.geometry import GeometryCollection, LineString, Point, Polygon, box
import geopandas
from geopandas import GeoDataFrame, GeoSeries, overlay, read_file
from geopandas._compat import HAS_PYPROJ, PANDAS_GE_30
import pytest
from geopandas.testing import assert_geodataframe_equal, assert_geoseries_equal
try:
from fiona.errors import DriverError
except ImportError:
class DriverError(Exception):
pass
DATA = os.path.join(os.path.abspath(os.path.dirname(__file__)), "data", "overlay")
@pytest.fixture
def dfs(request):
s1 = GeoSeries(
[
Polygon([(0, 0), (2, 0), (2, 2), (0, 2)]),
Polygon([(2, 2), (4, 2), (4, 4), (2, 4)]),
]
)
s2 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df1 = GeoDataFrame({"col1": [1, 2], "geometry": s1})
df2 = GeoDataFrame({"col2": [1, 2], "geometry": s2})
return df1, df2
@pytest.fixture(params=["default-index", "int-index", "string-index"])
def dfs_index(request, dfs):
df1, df2 = dfs
if request.param == "int-index":
df1.index = [1, 2]
df2.index = [0, 2]
if request.param == "string-index":
df1.index = ["row1", "row2"]
return df1, df2
@pytest.fixture(
params=["union", "intersection", "difference", "symmetric_difference", "identity"]
)
def how(request):
return request.param
@pytest.fixture(params=[True, False])
def keep_geom_type(request):
return request.param
def test_overlay(dfs_index, how):
"""
Basic overlay test with small dummy example dataframes (from docs).
Results obtained using QGIS 2.16 (Vector -> Geoprocessing Tools ->
Intersection / Union / ...), saved to GeoJSON
"""
df1, df2 = dfs_index
result = overlay(df1, df2, how=how)
# construction of result
def _read(name):
expected = read_file(os.path.join(DATA, "polys", f"df1_df2-{name}.geojson"))
expected.geometry.array.crs = None
for col in expected.columns[expected.dtypes == "int32"]:
expected[col] = expected[col].astype("int64")
return expected
if how == "identity":
expected_intersection = _read("intersection")
expected_difference = _read("difference")
expected = pd.concat(
[expected_intersection, expected_difference], ignore_index=True, sort=False
)
else:
expected = _read(how)
# TODO needed adaptations to result
if how == "union":
result = result.sort_values(["col1", "col2"]).reset_index(drop=True)
elif how == "difference":
result = result.reset_index(drop=True)
assert_geodataframe_equal(result, expected, check_column_type=False)
# for difference also reversed
if how == "difference":
result = overlay(df2, df1, how=how)
result = result.reset_index(drop=True)
expected = _read("difference-inverse")
assert_geodataframe_equal(result, expected, check_column_type=False)
@pytest.mark.parametrize("keep_geom_type", [True, False])
def test_overlay_invalid_input(keep_geom_type):
invalid_polygon = Polygon([(0, 0), (1, 1), (1, 2), (1, 1), (0, 0)])
square = Polygon(((0, 0), (1, 0), (1, 1), (0, 1), (0, 0)))
df1 = geopandas.GeoDataFrame({"A": [1, 2]}, geometry=[invalid_polygon, square])
df2 = geopandas.GeoDataFrame({"B": [5, 6]}, geometry=[square, square])
df1_df2 = df1.overlay(df2, keep_geom_type=keep_geom_type)
# As overlay only supports inputs with uniform geometry types, `make_valid` of
# `invalid_polygon` should always result in POLYGON EMPTY, so the number of results
# will should always be 2.
assert len(df1_df2) == 2
if keep_geom_type:
assert df1_df2.geom_type.isin(["Polygon"]).all()
@pytest.mark.filterwarnings("ignore:GeoSeries crs mismatch:UserWarning")
def test_overlay_nybb(how, nybb_filename):
polydf = read_file(nybb_filename)
# The circles have been constructed and saved at the time the expected
# results were created (exact output of buffer algorithm can slightly
# change over time -> use saved ones)
# # construct circles dataframe
# N = 10
# b = [int(x) for x in polydf.total_bounds]
# polydf2 = GeoDataFrame(
# [
# {"geometry": Point(x, y).buffer(10000), "value1": x + y, "value2": x - y}
# for x, y in zip(
# range(b[0], b[2], int((b[2] - b[0]) / N)),
# range(b[1], b[3], int((b[3] - b[1]) / N)),
# )
# ],
# crs=polydf.crs,
# )
polydf2 = read_file(os.path.join(DATA, "nybb_qgis", "polydf2.shp"))
result = overlay(polydf, polydf2, how=how)
cols = ["BoroCode", "BoroName", "Shape_Leng", "Shape_Area", "value1", "value2"]
if how == "difference":
cols = cols[:-2]
# expected result
if how == "identity":
# read union one, further down below we take the appropriate subset
expected = read_file(os.path.join(DATA, "nybb_qgis", "qgis-union.shp"))
else:
expected = read_file(os.path.join(DATA, "nybb_qgis", f"qgis-{how}.shp"))
# The result of QGIS for 'union' contains incorrect geometries:
# 24 is a full original circle overlapping with unioned geometries, and
# 27 is a completely duplicated row)
if how == "union":
expected = expected.drop([24, 27])
expected.reset_index(inplace=True, drop=True)
# Eliminate observations without geometries (issue from QGIS)
expected = expected[expected.is_valid]
expected.reset_index(inplace=True, drop=True)
if how == "identity":
expected = expected[expected.BoroCode.notnull()].copy()
boro_code_dtype = result["BoroCode"].dtype
if boro_code_dtype in ("int32", "int64"):
# Depending on the pandas version, the dtype might be int32 or int64
expected["BoroCode"] = expected["BoroCode"].astype(boro_code_dtype)
# Order GeoDataFrames
expected = expected.sort_values(cols).reset_index(drop=True)
# TODO needed adaptations to result
result = result.sort_values(cols).reset_index(drop=True)
if how in ("union", "identity"):
# concat < 0.23 sorts, so changes the order of the columns
# but at least we ensure 'geometry' is the last column
assert result.columns[-1] == "geometry"
assert len(result.columns) == len(expected.columns)
result = result.reindex(columns=expected.columns)
# the ordering of the spatial index results causes slight deviations
# in the resultant geometries for multipolygons
# for more details on the discussion, see:
# https://github.com/geopandas/geopandas/pull/1338
# https://github.com/geopandas/geopandas/issues/1337
# Temporary workaround below:
# simplify multipolygon geometry comparison
# since the order of the constituent polygons depends on
# the ordering of spatial indexing results, we cannot
# compare symmetric_difference results directly when the
# resultant geometry is a multipolygon
# first, check that all bounds and areas are approx equal
# this is a very rough check for multipolygon equality
kwargs = {}
pd.testing.assert_series_equal(
result.geometry.area, expected.geometry.area, **kwargs
)
pd.testing.assert_frame_equal(
result.geometry.bounds, expected.geometry.bounds, **kwargs
)
# There are two cases where the multipolygon have a different number
# of sub-geometries -> not solved by normalize (and thus drop for now)
if how == "symmetric_difference":
expected.loc[9, "geometry"] = None
result.loc[9, "geometry"] = None
if how == "union":
expected.loc[24, "geometry"] = None
result.loc[24, "geometry"] = None
# missing values get read as None in read_file for a string column, but
# are introduced as NaN by overlay
expected["BoroName"] = expected["BoroName"].fillna(np.nan)
assert_geodataframe_equal(
result,
expected,
normalize=True,
check_crs=False,
check_column_type=False,
check_less_precise=True,
)
def test_overlay_overlap(how):
"""
Overlay test with overlapping geometries in both dataframes.
Test files are created with::
import geopandas
from geopandas import GeoSeries, GeoDataFrame
from shapely.geometry import Point, Polygon, LineString
s1 = GeoSeries([Point(0, 0), Point(1.5, 0)]).buffer(1, resolution=2)
s2 = GeoSeries([Point(1, 1), Point(2, 2)]).buffer(1, resolution=2)
df1 = GeoDataFrame({'geometry': s1, 'col1':[1,2]})
df2 = GeoDataFrame({'geometry': s2, 'col2':[1, 2]})
ax = df1.plot(alpha=0.5)
df2.plot(alpha=0.5, ax=ax, color='C1')
df1.to_file('geopandas/geopandas/tests/data/df1_overlap.geojson',
driver='GeoJSON')
df2.to_file('geopandas/geopandas/tests/data/df2_overlap.geojson',
driver='GeoJSON')
and then overlay results are obtained from using QGIS 2.16
(Vector -> Geoprocessing Tools -> Intersection / Union / ...),
saved to GeoJSON.
"""
df1 = read_file(os.path.join(DATA, "overlap", "df1_overlap.geojson"))
df2 = read_file(os.path.join(DATA, "overlap", "df2_overlap.geojson"))
result = overlay(df1, df2, how=how)
if how == "identity":
raise pytest.skip()
expected = read_file(
os.path.join(DATA, "overlap", f"df1_df2_overlap-{how}.geojson")
)
if how == "union":
# the QGIS result has the last row duplicated, so removing this
expected = expected.iloc[:-1]
# TODO needed adaptations to result
result = result.reset_index(drop=True)
if how == "union":
result = result.sort_values(["col1", "col2"]).reset_index(drop=True)
assert_geodataframe_equal(
result,
expected,
normalize=True,
check_column_type=False,
check_less_precise=True,
)
@pytest.mark.parametrize("other_geometry", [False, True])
def test_geometry_not_named_geometry(dfs, how, other_geometry):
# Issue #306
# Add points and flip names
df1, df2 = dfs
df3 = df1.copy()
df3 = df3.rename(columns={"geometry": "polygons"})
df3 = df3.set_geometry("polygons")
if other_geometry:
df3["geometry"] = df1.centroid.geometry
assert df3.geometry.name == "polygons"
res1 = overlay(df1, df2, how=how)
res2 = overlay(df3, df2, how=how)
assert df3.geometry.name == "polygons"
if how == "difference":
# in case of 'difference', column names of left frame are preserved
assert res2.geometry.name == "polygons"
if other_geometry:
assert "geometry" in res2.columns
assert_geoseries_equal(
res2["geometry"], df3["geometry"], check_series_type=False
)
res2 = res2.drop(["geometry"], axis=1)
res2 = res2.rename(columns={"polygons": "geometry"})
res2 = res2.set_geometry("geometry")
# TODO if existing column is overwritten -> geometry not last column
if other_geometry and how == "intersection":
res2 = res2.reindex(columns=res1.columns)
assert_geodataframe_equal(res1, res2)
df4 = df2.copy()
df4 = df4.rename(columns={"geometry": "geom"})
df4 = df4.set_geometry("geom")
if other_geometry:
df4["geometry"] = df2.centroid.geometry
assert df4.geometry.name == "geom"
res1 = overlay(df1, df2, how=how)
res2 = overlay(df1, df4, how=how)
assert_geodataframe_equal(res1, res2)
def test_bad_how(dfs):
df1, df2 = dfs
with pytest.raises(ValueError):
overlay(df1, df2, how="spandex")
def test_duplicate_column_name(dfs, how):
if how == "difference":
pytest.skip("Difference uses columns from one df only.")
df1, df2 = dfs
df2r = df2.rename(columns={"col2": "col1"})
res = overlay(df1, df2r, how=how)
assert ("col1_1" in res.columns) and ("col1_2" in res.columns)
def test_geoseries_warning(dfs):
df1, df2 = dfs
# Issue #305
with pytest.raises(NotImplementedError):
overlay(df1, df2.geometry, how="union")
@pytest.mark.skipif(not HAS_PYPROJ, reason="pyproj not available")
def test_preserve_crs(dfs, how):
df1, df2 = dfs
result = overlay(df1, df2, how=how)
assert result.crs is None
crs = "epsg:4326"
df1.crs = crs
df2.crs = crs
result = overlay(df1, df2, how=how)
assert result.crs == crs
@pytest.mark.skipif(not HAS_PYPROJ, reason="pyproj not available")
def test_crs_mismatch(dfs, how):
df1, df2 = dfs
df1.crs = 4326
df2.crs = 3857
with pytest.warns(UserWarning, match="CRS mismatch between the CRS"):
overlay(df1, df2, how=how)
def test_empty_intersection(dfs):
df1, df2 = dfs
polys3 = GeoSeries(
[
Polygon([(-1, -1), (-3, -1), (-3, -3), (-1, -3)]),
Polygon([(-3, -3), (-5, -3), (-5, -5), (-3, -5)]),
]
)
df3 = GeoDataFrame({"geometry": polys3, "col3": [1, 2]})
expected = GeoDataFrame([], columns=["col1", "col3", "geometry"])
result = overlay(df1, df3)
assert_geodataframe_equal(result, expected, check_dtype=False)
def test_correct_index(dfs):
# GH883 - case where the index was not properly reset
df1, df2 = dfs
polys3 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(-1, 1), (1, 1), (1, 3), (-1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df3 = GeoDataFrame({"geometry": polys3, "col3": [1, 2, 3]})
i1 = Polygon([(1, 1), (1, 3), (3, 3), (3, 1), (1, 1)])
i2 = Polygon([(3, 3), (3, 5), (5, 5), (5, 3), (3, 3)])
expected = GeoDataFrame(
[[1, 1, i1], [3, 2, i2]], columns=["col3", "col2", "geometry"]
)
result = overlay(df3, df2, keep_geom_type=True)
assert_geodataframe_equal(result, expected)
def test_warn_on_keep_geom_type(dfs):
df1, df2 = dfs
polys3 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(-1, 1), (1, 1), (1, 3), (-1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df3 = GeoDataFrame({"geometry": polys3})
with pytest.warns(UserWarning, match="`keep_geom_type=True` in overlay"):
overlay(df2, df3, keep_geom_type=None)
@pytest.mark.parametrize(
"geom_types", ["polys", "poly_line", "poly_point", "line_poly", "point_poly"]
)
def test_overlay_strict(how, keep_geom_type, geom_types):
"""
Test of mixed geometry types on input and output. Expected results initially
generated using following snippet.
polys1 = gpd.GeoSeries([Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)])])
df1 = gpd.GeoDataFrame({'col1': [1, 2], 'geometry': polys1})
polys2 = gpd.GeoSeries([Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(-1, 1), (1, 1), (1, 3), (-1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)])])
df2 = gpd.GeoDataFrame({'geometry': polys2, 'col2': [1, 2, 3]})
lines1 = gpd.GeoSeries([LineString([(2, 0), (2, 4), (6, 4)]),
LineString([(0, 3), (6, 3)])])
df3 = gpd.GeoDataFrame({'col3': [1, 2], 'geometry': lines1})
points1 = gpd.GeoSeries([Point((2, 2)),
Point((3, 3))])
df4 = gpd.GeoDataFrame({'col4': [1, 2], 'geometry': points1})
params=["union", "intersection", "difference", "symmetric_difference",
"identity"]
stricts = [True, False]
for p in params:
for s in stricts:
exp = gpd.overlay(df1, df2, how=p, keep_geom_type=s)
if not exp.empty:
exp.to_file('polys_{p}_{s}.geojson'.format(p=p, s=s),
driver='GeoJSON')
for p in params:
for s in stricts:
exp = gpd.overlay(df1, df3, how=p, keep_geom_type=s)
if not exp.empty:
exp.to_file('poly_line_{p}_{s}.geojson'.format(p=p, s=s),
driver='GeoJSON')
for p in params:
for s in stricts:
exp = gpd.overlay(df1, df4, how=p, keep_geom_type=s)
if not exp.empty:
exp.to_file('poly_point_{p}_{s}.geojson'.format(p=p, s=s),
driver='GeoJSON')
"""
polys1 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df1 = GeoDataFrame({"col1": [1, 2], "geometry": polys1})
polys2 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(-1, 1), (1, 1), (1, 3), (-1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df2 = GeoDataFrame({"geometry": polys2, "col2": [1, 2, 3]})
lines1 = GeoSeries(
[LineString([(2, 0), (2, 4), (6, 4)]), LineString([(0, 3), (6, 3)])]
)
df3 = GeoDataFrame({"col3": [1, 2], "geometry": lines1})
points1 = GeoSeries([Point((2, 2)), Point((3, 3))])
df4 = GeoDataFrame({"col4": [1, 2], "geometry": points1})
if geom_types == "polys":
result = overlay(df1, df2, how=how, keep_geom_type=keep_geom_type)
elif geom_types == "poly_line":
result = overlay(df1, df3, how=how, keep_geom_type=keep_geom_type)
elif geom_types == "poly_point":
result = overlay(df1, df4, how=how, keep_geom_type=keep_geom_type)
elif geom_types == "line_poly":
result = overlay(df3, df1, how=how, keep_geom_type=keep_geom_type)
elif geom_types == "point_poly":
result = overlay(df4, df1, how=how, keep_geom_type=keep_geom_type)
try:
expected = read_file(
os.path.join(
DATA,
"strict",
f"{geom_types}_{how}_{keep_geom_type}.geojson",
)
)
# the order depends on the spatial index used
# so we sort the resultant dataframes to get a consistent order
# independently of the spatial index implementation
assert all(expected.columns == result.columns), "Column name mismatch"
cols = list(set(result.columns) - {"geometry"})
expected = expected.sort_values(cols, axis=0).reset_index(drop=True)
result = result.sort_values(cols, axis=0).reset_index(drop=True)
# some columns are all-NaN in the result, but get read as object dtype
# column of None values in read_file
for col in ["col1", "col3", "col4"]:
if col in expected.columns and expected[col].isna().all():
expected[col] = expected[col].astype("float64")
assert_geodataframe_equal(
result,
expected,
normalize=True,
check_column_type=False,
check_less_precise=True,
check_crs=False,
check_dtype=False,
)
except DriverError: # fiona >= 1.8
assert result.empty
except OSError: # fiona < 1.8
assert result.empty
except RuntimeError: # pyogrio.DataSourceError
assert result.empty
def test_mixed_geom_error():
polys1 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df1 = GeoDataFrame({"col1": [1, 2], "geometry": polys1})
mixed = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
LineString([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
dfmixed = GeoDataFrame({"col1": [1, 2], "geometry": mixed})
with pytest.raises(NotImplementedError):
overlay(df1, dfmixed, keep_geom_type=True)
def test_keep_geom_type_error():
gcol = GeoSeries(
GeometryCollection(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
LineString([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
)
dfcol = GeoDataFrame({"col1": [2], "geometry": gcol})
polys1 = GeoSeries(
[
Polygon([(1, 1), (3, 1), (3, 3), (1, 3)]),
Polygon([(3, 3), (5, 3), (5, 5), (3, 5)]),
]
)
df1 = GeoDataFrame({"col1": [1, 2], "geometry": polys1})
with pytest.raises(TypeError):
overlay(dfcol, df1, keep_geom_type=True)
def test_keep_geom_type_geometry_collection():
# GH 1581
df1 = read_file(os.path.join(DATA, "geom_type", "df1.geojson"))
df2 = read_file(os.path.join(DATA, "geom_type", "df2.geojson"))
with pytest.warns(UserWarning, match="`keep_geom_type=True` in overlay"):
intersection = overlay(df1, df2, keep_geom_type=None)
assert len(intersection) == 1
assert (intersection.geom_type == "Polygon").all()
intersection = overlay(df1, df2, keep_geom_type=True)
assert len(intersection) == 1
assert (intersection.geom_type == "Polygon").all()
intersection = overlay(df1, df2, keep_geom_type=False)
assert len(intersection) == 1
assert (intersection.geom_type == "GeometryCollection").all()
def test_keep_geom_type_geometry_collection2():
polys1 = [
box(0, 0, 1, 1),
box(1, 1, 3, 3).union(box(1, 3, 5, 5)),
]
polys2 = [
box(0, 0, 1, 1),
box(3, 1, 4, 2).union(box(4, 1, 5, 4)),
]
df1 = GeoDataFrame({"left": [0, 1], "geometry": polys1})
df2 = GeoDataFrame({"right": [0, 1], "geometry": polys2})
result1 = overlay(df1, df2, keep_geom_type=True)
expected1 = GeoDataFrame(
{
"left": [0, 1],
"right": [0, 1],
"geometry": [box(0, 0, 1, 1), box(4, 3, 5, 4)],
}
)
assert_geodataframe_equal(result1, expected1)
result1 = overlay(df1, df2, keep_geom_type=False)
expected1 = GeoDataFrame(
{
"left": [0, 1, 1],
"right": [0, 0, 1],
"geometry": [
box(0, 0, 1, 1),
Point(1, 1),
GeometryCollection([box(4, 3, 5, 4), LineString([(3, 1), (3, 2)])]),
],
}
)
assert_geodataframe_equal(result1, expected1)
def test_keep_geom_type_geomcoll_different_types():
polys1 = [box(0, 1, 1, 3), box(10, 10, 12, 12)]
polys2 = [
Polygon([(1, 0), (3, 0), (3, 3), (1, 3), (1, 2), (2, 2), (2, 1), (1, 1)]),
box(11, 11, 13, 13),
]
df1 = GeoDataFrame({"left": [0, 1], "geometry": polys1})
df2 = GeoDataFrame({"right": [0, 1], "geometry": polys2})
result1 = overlay(df1, df2, keep_geom_type=True)
expected1 = GeoDataFrame(
{
"left": [1],
"right": [1],
"geometry": [box(11, 11, 12, 12)],
}
)
assert_geodataframe_equal(result1, expected1)
result2 = overlay(df1, df2, keep_geom_type=False)
expected2 = GeoDataFrame(
{
"left": [0, 1],
"right": [0, 1],
"geometry": [
GeometryCollection([LineString([(1, 2), (1, 3)]), Point(1, 1)]),
box(11, 11, 12, 12),
],
}
)
assert_geodataframe_equal(result2, expected2)
def test_keep_geom_type_geometry_collection_difference():
# GH 2163
polys1 = [
box(0, 0, 1, 1),
box(1, 1, 2, 2),
]
# the tiny sliver in the second geometry may be converted to a
# linestring during the overlay process due to floating point errors
# on some platforms
polys2 = [
box(0, 0, 1, 1),
box(1, 1, 2, 3).union(box(2, 2, 3, 2.00000000000000001)),
]
df1 = GeoDataFrame({"left": [0, 1], "geometry": polys1})
df2 = GeoDataFrame({"right": [0, 1], "geometry": polys2})
result1 = overlay(df2, df1, keep_geom_type=True, how="difference")
expected1 = GeoDataFrame(
{
"right": [1],
"geometry": [box(1, 2, 2, 3)],
},
)
assert_geodataframe_equal(result1, expected1)
@pytest.mark.parametrize("should_make_valid", [True, False])
def test_overlap_make_valid(should_make_valid):
bowtie = Polygon([(1, 1), (9, 9), (9, 1), (1, 9), (1, 1)])
assert not bowtie.is_valid
fixed_bowtie = make_valid(bowtie)
assert fixed_bowtie.is_valid
df1 = GeoDataFrame({"col1": ["region"], "geometry": GeoSeries([box(0, 0, 10, 10)])})
df_bowtie = GeoDataFrame(
{"col1": ["invalid", "valid"], "geometry": GeoSeries([bowtie, fixed_bowtie])}
)
if should_make_valid:
df_overlay_bowtie = overlay(df1, df_bowtie, make_valid=should_make_valid)
assert df_overlay_bowtie.at[0, "geometry"].equals(fixed_bowtie)
assert df_overlay_bowtie.at[1, "geometry"].equals(fixed_bowtie)
else:
with pytest.raises(ValueError, match="1 invalid input geometries"):
overlay(df1, df_bowtie, make_valid=should_make_valid)
def test_empty_overlay_return_non_duplicated_columns(nybb_filename):
nybb = geopandas.read_file(nybb_filename)
nybb2 = nybb.copy()
nybb2.geometry = nybb2.translate(20000000)
result = geopandas.overlay(nybb, nybb2)
expected = GeoDataFrame(
columns=[
"BoroCode_1",
"BoroName_1",
"Shape_Leng_1",
"Shape_Area_1",
"BoroCode_2",
"BoroName_2",
"Shape_Leng_2",
"Shape_Area_2",
"geometry",
],
crs=nybb.crs,
)
assert_geodataframe_equal(result, expected, check_dtype=False)
def test_non_overlapping(how):
p1 = Polygon([(0, 0), (2, 0), (2, 2), (0, 2)])
p2 = Polygon([(3, 3), (5, 3), (5, 5), (3, 5)])
df1 = GeoDataFrame({"id": [1], "col1": [1], "geometry": [p1]})
df2 = GeoDataFrame({"id": [2], "col2": [2], "geometry": [p2]})
result = overlay(df1, df2, how=how)
if how == "intersection":
expected = GeoDataFrame(
{
"id_1": np.array([], dtype="int64"),
"col1": np.array([], dtype="int64"),
"id_2": np.array([], dtype="int64"),
"col2": np.array([], dtype="int64"),
"geometry": [],
}
)
elif how == "union":
expected = GeoDataFrame(
{
"id_1": [1, np.nan],
"col1": [1, np.nan],
"id_2": [np.nan, 2],
"col2": [np.nan, 2],
"geometry": [p1, p2],
}
)
elif how == "identity":
expected = GeoDataFrame(
{
"id_1": [1],
"col1": [1],
"id_2": [np.nan],
"col2": [np.nan],
"geometry": [p1],
}
)
elif how == "symmetric_difference":
expected = GeoDataFrame(
{
"id_1": [1, np.nan],
"col1": [1, np.nan],
"id_2": [np.nan, 2],
"col2": [np.nan, 2],
"geometry": [p1, p2],
}
)
elif how == "difference":
expected = GeoDataFrame(
{
"id": [1],
"col1": [1],
"geometry": [p1],
}
)
assert_geodataframe_equal(result, expected)
def test_no_intersection():
# overlapping bounds but non-overlapping geometries
gs = GeoSeries([Point(x, x).buffer(0.1) for x in range(3)])
gdf1 = GeoDataFrame({"foo": ["a", "b", "c"]}, geometry=gs)
gdf2 = GeoDataFrame({"bar": ["1", "3", "5"]}, geometry=gs.translate(1))
expected = GeoDataFrame(columns=["foo", "bar", "geometry"])
if PANDAS_GE_30 and pd.options.future.infer_string:
expected = expected.astype({"foo": "str", "bar": "str"})
result = overlay(gdf1, gdf2, how="intersection")
assert_geodataframe_equal(result, expected, check_index_type=False)
def test_zero_len():
# https://github.com/geopandas/geopandas/issues/3422
gdf1 = GeoDataFrame(
{
"geometry": [
Polygon([[0.0, 0.0], [2.0, 0.0], [2.0, 2.0], [0.0, 2.0], [0.0, 0.0]])
]
},
crs=4326,
)
# overlay with empty geodataframe shouldn't throw
gdf2 = GeoDataFrame({"geometry": []}, crs=4326)
res = gdf1.overlay(gdf2, how="union")
assert_geodataframe_equal(res, gdf1)
gdf2 = GeoDataFrame(geometry=[], crs=4326)
res = gdf1.overlay(gdf2, how="union")
assert_geodataframe_equal(res, gdf1)
class TestOverlayWikiExample:
def setup_method(self):
self.layer_a = GeoDataFrame(data={"id": ["a"]}, geometry=[box(0, 2, 6, 6)])
self.layer_b = GeoDataFrame(data={"id": ["b"]}, geometry=[box(4, 0, 10, 4)])
self.intersection = GeoDataFrame(
data={"id_1": ["a"], "id_2": ["b"]}, geometry=[box(4, 2, 6, 4)]
)
self.union = GeoDataFrame(
data={"id_1": ["a", "a", np.nan], "id_2": ["b", np.nan, "b"]},
geometry=[
box(4, 2, 6, 4),
Polygon([(4, 2), (0, 2), (0, 6), (6, 6), (6, 4), (4, 4), (4, 2)]),
Polygon([(10, 0), (4, 0), (4, 2), (6, 2), (6, 4), (10, 4), (10, 0)]),
],
)
self.a_difference_b = GeoDataFrame(
data={"id": ["a"]},
geometry=[
Polygon([(4, 2), (0, 2), (0, 6), (6, 6), (6, 4), (4, 4), (4, 2)])
],
)
self.b_difference_a = GeoDataFrame(
data={"id": ["b"]},
geometry=[
Polygon([(10, 0), (4, 0), (4, 2), (6, 2), (6, 4), (10, 4), (10, 0)])
],
)
self.symmetric_difference = GeoDataFrame(
data={"id_1": ["a", np.nan], "id_2": [np.nan, "b"]},
geometry=[
Polygon([(4, 2), (0, 2), (0, 6), (6, 6), (6, 4), (4, 4), (4, 2)]),
Polygon([(10, 0), (4, 0), (4, 2), (6, 2), (6, 4), (10, 4), (10, 0)]),
],
)
self.a_identity_b = GeoDataFrame(
data={"id_1": ["a", "a"], "id_2": ["b", np.nan]},
geometry=[
box(4, 2, 6, 4),
Polygon([(4, 2), (0, 2), (0, 6), (6, 6), (6, 4), (4, 4), (4, 2)]),
],
)
self.b_identity_a = GeoDataFrame(
data={"id_1": ["b", "b"], "id_2": ["a", np.nan]},
geometry=[
box(4, 2, 6, 4),
Polygon([(10, 0), (4, 0), (4, 2), (6, 2), (6, 4), (10, 4), (10, 0)]),
],
)
def test_intersection(self):
df_result = overlay(self.layer_a, self.layer_b, how="intersection")
assert_geodataframe_equal(df_result, self.intersection)
def test_union(self):
df_result = overlay(self.layer_a, self.layer_b, how="union")
assert_geodataframe_equal(df_result, self.union)
def test_a_difference_b(self):
df_result = overlay(self.layer_a, self.layer_b, how="difference")
assert_geodataframe_equal(df_result, self.a_difference_b)
def test_b_difference_a(self):
df_result = overlay(self.layer_b, self.layer_a, how="difference")
assert_geodataframe_equal(df_result, self.b_difference_a)
def test_symmetric_difference(self):
df_result = overlay(self.layer_a, self.layer_b, how="symmetric_difference")
assert_geodataframe_equal(df_result, self.symmetric_difference)
def test_a_identity_b(self):
df_result = overlay(self.layer_a, self.layer_b, how="identity")
assert_geodataframe_equal(df_result, self.a_identity_b)
def test_b_identity_a(self):
df_result = overlay(self.layer_b, self.layer_a, how="identity")
assert_geodataframe_equal(df_result, self.b_identity_a)
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