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# -*- coding: utf-8 -*-
# imageio is distributed under the terms of the (new) BSD License.
"""
Definition of the Request object, which acts as a kind of bridge between
what the user wants and what the plugins can.
"""
from __future__ import absolute_import, print_function, division
import sys
import os
from io import BytesIO
import zipfile
import tempfile
import shutil
from ..core import string_types, binary_type, urlopen, get_remote_file
if sys.version_info < (3,):
FileNotFoundError = OSError
try:
from pathlib import Path
except ImportError:
Path = None
# URI types
URI_BYTES = 1
URI_FILE = 2
URI_FILENAME = 3
URI_ZIPPED = 4
URI_HTTP = 5
URI_FTP = 6
SPECIAL_READ_URIS = "<video", "<screen>", "<clipboard>"
# The user can use this string in a write call to get the data back as bytes.
RETURN_BYTES = "<bytes>"
# Example images that will be auto-downloaded
EXAMPLE_IMAGES = {
"astronaut.png": "Image of the astronaut Eileen Collins",
"camera.png": "Classic grayscale image of a photographer",
"checkerboard.png": "Black and white image of a chekerboard",
"clock.png": "Photo of a clock with motion blur (Stefan van der Walt)",
"coffee.png": "Image of a cup of coffee (Rachel Michetti)",
"chelsea.png": "Image of Stefan's cat",
"wikkie.png": "Image of Almar's cat",
"coins.png": "Image showing greek coins from Pompeii",
"horse.png": "Image showing the silhouette of a horse (Andreas Preuss)",
"hubble_deep_field.png": "Photograph taken by Hubble telescope (NASA)",
"immunohistochemistry.png": "Immunohistochemical (IHC) staining",
"moon.png": "Image showing a portion of the surface of the moon",
"page.png": "A scanned page of text",
"text.png": "A photograph of handdrawn text",
"chelsea.zip": "The chelsea.png in a zipfile (for testing)",
"chelsea.bsdf": "The chelsea.png in a BSDF file(for testing)",
"newtonscradle.gif": "Animated GIF of a newton's cradle",
"cockatoo.mp4": "Video file of a cockatoo",
"stent.npz": "Volumetric image showing a stented abdominal aorta",
}
class Request(object):
""" Request(uri, mode, **kwargs)
Represents a request for reading or saving an image resource. This
object wraps information to that request and acts as an interface
for the plugins to several resources; it allows the user to read
from filenames, files, http, zipfiles, raw bytes, etc., but offer
a simple interface to the plugins via ``get_file()`` and
``get_local_filename()``.
For each read/write operation a single Request instance is used and passed
to the can_read/can_write method of a format, and subsequently to
the Reader/Writer class. This allows rudimentary passing of
information between different formats and between a format and
associated reader/writer.
parameters
----------
uri : {str, bytes, file}
The resource to load the image from.
mode : str
The first character is "r" or "w", indicating a read or write
request. The second character is used to indicate the kind of data:
"i" for an image, "I" for multiple images, "v" for a volume,
"V" for multiple volumes, "?" for don't care.
"""
def __init__(self, uri, mode, **kwargs):
# General
self._uri_type = None
self._filename = None
self._extension = None
self._kwargs = kwargs
self._result = None # Some write actions may have a result
# To handle the user-side
self._filename_zip = None # not None if a zipfile is used
self._bytes = None # Incoming bytes
self._zipfile = None # To store a zipfile instance (if used)
# To handle the plugin side
self._file = None # To store the file instance
self._filename_local = None # not None if using tempfile on this FS
self._firstbytes = None # For easy header parsing
# To store formats that may be able to fulfil this request
# self._potential_formats = []
# Check mode
self._mode = mode
if not isinstance(mode, string_types):
raise ValueError("Request requires mode must be a string")
if not len(mode) == 2:
raise ValueError("Request requires mode to have two chars")
if mode[0] not in "rw":
raise ValueError('Request requires mode[0] to be "r" or "w"')
if mode[1] not in "iIvV?":
raise ValueError('Request requires mode[1] to be in "iIvV?"')
# Parse what was given
self._parse_uri(uri)
# Set extension
if self._filename is not None:
ext = self._filename
if self._filename.startswith(("http://", "https://", "ftp://", "ftps://")):
ext = ext.split("?")[0]
self._extension = "." + ext.split(".")[-1].lower()
def _parse_uri(self, uri):
""" Try to figure our what we were given
"""
py3k = sys.version_info[0] == 3
is_read_request = self.mode[0] == "r"
is_write_request = self.mode[0] == "w"
if isinstance(uri, string_types):
# Explicit
if uri.startswith("imageio:"):
if is_write_request:
raise RuntimeError("Cannot write to the standard images.")
fn = uri.split(":", 1)[-1].lower()
fn, _, zip_part = fn.partition(".zip/")
if zip_part:
fn += ".zip"
if fn not in EXAMPLE_IMAGES:
raise ValueError("Unknown standard image %r." % fn)
self._uri_type = URI_FILENAME
self._filename = get_remote_file("images/" + fn, auto=True)
if zip_part:
self._filename += "/" + zip_part
elif uri.startswith("http://") or uri.startswith("https://"):
self._uri_type = URI_HTTP
self._filename = uri
elif uri.startswith("ftp://") or uri.startswith("ftps://"):
self._uri_type = URI_FTP
self._filename = uri
elif uri.startswith("file://"):
self._uri_type = URI_FILENAME
self._filename = uri[7:]
elif uri.startswith(SPECIAL_READ_URIS) and is_read_request:
self._uri_type = URI_BYTES
self._filename = uri
elif uri.startswith(RETURN_BYTES) and is_write_request:
self._uri_type = URI_BYTES
self._filename = uri
# Less explicit (particularly on py 2.x)
elif py3k:
self._uri_type = URI_FILENAME
self._filename = uri
else: # pragma: no cover - our ref for coverage is py3k
try:
isfile = os.path.isfile(uri)
except Exception:
isfile = False # If checking does not even work ...
if isfile:
self._uri_type = URI_FILENAME
self._filename = uri
elif len(uri) < 256: # Can go wrong with veeery tiny images
self._uri_type = URI_FILENAME
self._filename = uri
elif isinstance(uri, binary_type) and is_read_request:
self._uri_type = URI_BYTES
self._filename = "<bytes>"
self._bytes = uri
else:
self._uri_type = URI_FILENAME
self._filename = uri
elif py3k and isinstance(uri, binary_type) and is_read_request:
self._uri_type = URI_BYTES
self._filename = "<bytes>"
self._bytes = uri
elif Path is not None and isinstance(uri, Path):
self._uri_type = URI_FILENAME
self._filename = str(uri)
# Files
elif is_read_request:
if hasattr(uri, "read") and hasattr(uri, "close"):
self._uri_type = URI_FILE
self._filename = "<file>"
self._file = uri
elif is_write_request:
if hasattr(uri, "write") and hasattr(uri, "close"):
self._uri_type = URI_FILE
self._filename = "<file>"
self._file = uri
# Expand user dir
if self._uri_type == URI_FILENAME and self._filename.startswith("~"):
self._filename = os.path.expanduser(self._filename)
# Check if a zipfile
if self._uri_type == URI_FILENAME:
# Search for zip extension followed by a path separater
for needle in [".zip/", ".zip\\"]:
zip_i = self._filename.lower().find(needle)
if zip_i > 0:
zip_i += 4
self._uri_type = URI_ZIPPED
self._filename_zip = (
self._filename[:zip_i],
self._filename[zip_i:].lstrip("/\\"),
)
break
# Check if we could read it
if self._uri_type is None:
uri_r = repr(uri)
if len(uri_r) > 60:
uri_r = uri_r[:57] + "..."
raise IOError("Cannot understand given URI: %s." % uri_r)
# Check if this is supported
noWriting = [URI_HTTP, URI_FTP]
if is_write_request and self._uri_type in noWriting:
raise IOError("imageio does not support writing to http/ftp.")
# Deprecated way to load standard images, give a sensible error message
if is_read_request and self._uri_type in [URI_FILENAME, URI_ZIPPED]:
fn = self._filename
if self._filename_zip:
fn = self._filename_zip[0]
if (not os.path.exists(fn)) and (fn in EXAMPLE_IMAGES):
raise IOError(
"No such file: %r. This file looks like one of "
"the standard images, but from imageio 2.1, "
"standard images have to be specified using "
'"imageio:%s".' % (fn, fn)
)
# Make filename absolute
if self._uri_type in [URI_FILENAME, URI_ZIPPED]:
if self._filename_zip:
self._filename_zip = (
os.path.abspath(self._filename_zip[0]),
self._filename_zip[1],
)
else:
self._filename = os.path.abspath(self._filename)
# Check whether file name is valid
if self._uri_type in [URI_FILENAME, URI_ZIPPED]:
fn = self._filename
if self._filename_zip:
fn = self._filename_zip[0]
if is_read_request:
# Reading: check that the file exists (but is allowed a dir)
if not os.path.exists(fn):
raise FileNotFoundError("No such file: '%s'" % fn)
else:
# Writing: check that the directory to write to does exist
dn = os.path.dirname(fn)
if not os.path.exists(dn):
raise FileNotFoundError("The directory %r does not exist" % dn)
@property
def filename(self):
""" The uri for which reading/saving was requested. This
can be a filename, an http address, or other resource
identifier. Do not rely on the filename to obtain the data,
but use ``get_file()`` or ``get_local_filename()`` instead.
"""
return self._filename
@property
def extension(self):
""" The (lowercase) extension of the requested filename.
Suffixes in url's are stripped. Can be None if the request is
not based on a filename.
"""
return self._extension
@property
def mode(self):
""" The mode of the request. The first character is "r" or "w",
indicating a read or write request. The second character is
used to indicate the kind of data:
"i" for an image, "I" for multiple images, "v" for a volume,
"V" for multiple volumes, "?" for don't care.
"""
return self._mode
@property
def kwargs(self):
""" The dict of keyword arguments supplied by the user.
"""
return self._kwargs
## For obtaining data
def get_file(self):
""" get_file()
Get a file object for the resource associated with this request.
If this is a reading request, the file is in read mode,
otherwise in write mode. This method is not thread safe. Plugins
do not need to close the file when done.
This is the preferred way to read/write the data. But if a
format cannot handle file-like objects, they should use
``get_local_filename()``.
"""
want_to_write = self.mode[0] == "w"
# Is there already a file?
# Either _uri_type == URI_FILE, or we already opened the file,
# e.g. by using firstbytes
if self._file is not None:
return self._file
if self._uri_type == URI_BYTES:
if want_to_write:
self._file = BytesIO()
else:
self._file = BytesIO(self._bytes)
elif self._uri_type == URI_FILENAME:
if want_to_write:
self._file = open(self.filename, "wb")
else:
self._file = open(self.filename, "rb")
elif self._uri_type == URI_ZIPPED:
# Get the correct filename
filename, name = self._filename_zip
if want_to_write:
# Create new file object, we catch the bytes in finish()
self._file = BytesIO()
else:
# Open zipfile and open new file object for specific file
self._zipfile = zipfile.ZipFile(filename, "r")
self._file = self._zipfile.open(name, "r")
make_file_object_support_noop_seeks(self._file)
elif self._uri_type in [URI_HTTP or URI_FTP]:
assert not want_to_write # This should have been tested in init
self._file = urlopen(self.filename, timeout=5)
make_file_object_support_noop_seeks(self._file)
return self._file
def get_local_filename(self):
""" get_local_filename()
If the filename is an existing file on this filesystem, return
that. Otherwise a temporary file is created on the local file
system which can be used by the format to read from or write to.
"""
if self._uri_type == URI_FILENAME:
return self._filename
else:
# Get filename
if self._uri_type in (URI_HTTP, URI_FTP):
ext = os.path.splitext(self._filename.split("?")[0])[1]
else:
ext = os.path.splitext(self._filename)[1]
self._filename_local = tempfile.mktemp(ext, "imageio_")
# Write stuff to it?
if self.mode[0] == "r":
with open(self._filename_local, "wb") as file:
shutil.copyfileobj(self.get_file(), file)
return self._filename_local
def finish(self):
""" finish()
For internal use (called when the context of the reader/writer
exits). Finishes this request. Close open files and process
results.
"""
# Init
bytes = None
# Collect bytes from temp file
if self.mode[0] == "w" and self._filename_local:
with open(self._filename_local, "rb") as file:
bytes = file.read()
# Collect bytes from BytesIO file object.
written = (self.mode[0] == "w") and self._file
if written and self._uri_type in [URI_BYTES, URI_ZIPPED]:
bytes = self._file.getvalue()
# Close open files that we know of (and are responsible for)
if self._file and self._uri_type != URI_FILE:
self._file.close()
self._file = None
if self._zipfile:
self._zipfile.close()
self._zipfile = None
# Remove temp file
if self._filename_local:
try:
os.remove(self._filename_local)
except Exception: # pragma: no cover
pass
self._filename_local = None
# Handle bytes that we collected
if bytes is not None:
if self._uri_type == URI_BYTES:
self._result = bytes # Picked up by imread function
elif self._uri_type == URI_ZIPPED:
zf = zipfile.ZipFile(self._filename_zip[0], "a")
zf.writestr(self._filename_zip[1], bytes)
zf.close()
# Detach so gc can clean even if a reference of self lingers
self._bytes = None
def get_result(self):
""" For internal use. In some situations a write action can have
a result (bytes data). That is obtained with this function.
"""
self._result, res = None, self._result
return res
@property
def firstbytes(self):
""" The first 256 bytes of the file. These can be used to
parse the header to determine the file-format.
"""
if self._firstbytes is None:
self._read_first_bytes()
return self._firstbytes
def _read_first_bytes(self, N=256):
if self._bytes is not None:
self._firstbytes = self._bytes[:N]
else:
# Prepare
try:
f = self.get_file()
except IOError:
if os.path.isdir(self.filename): # A directory, e.g. for DICOM
self._firstbytes = binary_type()
return
raise
try:
i = f.tell()
except Exception:
i = None
# Read
self._firstbytes = read_n_bytes(f, N)
# Set back
try:
if i is None:
raise Exception("cannot seek with None")
f.seek(i)
except Exception:
# Prevent get_file() from reusing the file
self._file = None
# If the given URI was a file object, we have a problem,
if self._uri_type == URI_FILE:
raise IOError("Cannot seek back after getting firstbytes!")
def read_n_bytes(f, N):
""" read_n_bytes(file, n)
Read n bytes from the given file, or less if the file has less
bytes. Returns zero bytes if the file is closed.
"""
bb = binary_type()
while len(bb) < N:
extra_bytes = f.read(N - len(bb))
if not extra_bytes:
break
bb += extra_bytes
return bb
def make_file_object_support_noop_seeks(f):
"""This fixes up an HTTPResponse object so that it can tell(), and also
seek() will work if its effectively a no-op. This allows tools like Pillow
to use the file object.
"""
count = [0]
def read(n=None):
res = ori_read(n)
count[0] += len(res)
return res
def tell():
return count[0]
def seek(i, mode=0):
if not (mode == 0 and i == count[0]):
ori_seek(i, mode)
def fail_seek(i, mode=0):
raise RuntimeError("No seeking allowed!")
# Note, there is currently no protection from wrapping an object more than
# once, it will (probably) work though, because closures.
ori_read = f.read
ori_seek = f.seek if hasattr(f, "seek") else fail_seek
f.read = read
f.tell = tell
f.seek = seek
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