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import yaml
import os
from mcstasscript.data.data import McStasData
import mcstasscript.helper.managed_mcrun as managed_mcrun
def name_search(name, data_list):
""""
name_search returns McStasData instance with specific name if it is
in the given data_list. If no match is found, a search for the data
filename is performed. If several matches are found, a list of
McStasData objects are returned.
The index of certain datasets in the data_list can change if
additional monitors are added so it is more convenient to access
the data files using their names.
Parameters
----------
name : string
Name of the dataset to be retrieved (component_name)
data_list : List of McStasData instances
List of datasets to search
"""
if type(data_list) is not list:
raise RuntimeError(
"name_search function needs list of McStasData as input.")
if len(data_list) == 0:
raise RuntimeError("Given data list empty.")
if not isinstance(data_list[0], McStasData):
raise RuntimeError(
"name_search function needs objects of type McStasData as input.")
# Search by component name
list_result = []
for check in data_list:
if check.name == name:
list_result.append(check)
if len(list_result) == 0:
# Search by filename
for check in data_list:
if check.metadata.filename == name:
list_result.append(check)
if len(list_result) == 0:
raise NameError("No dataset with name: \""
+ name
+ "\" found.")
if len(list_result) == 1:
return list_result[0]
else:
return list_result
def name_plot_options(name, data_list, **kwargs):
""""
name_plot_options passes keyword arguments to dataset with certain
name in given data list
Function for quickly setting plotting options on a certain dataset
n a larger list of datasets
Parameters
----------
name : string
Name of the dataset to be modified (component_name)
data_list : List of McStasData instances
List of datasets to search
kwargs : keyword arguments
Keyword arguments passed to set_plot_options in
McStasPlotOptions
"""
object_to_modify = name_search(name, data_list)
if type(object_to_modify) is not list:
object_to_modify.set_plot_options(**kwargs)
else:
for data_object in object_to_modify:
data_object.set_plot_options(**kwargs)
def load_data(foldername):
"""
Loads data from a McStas data folder including mccode.sim
Parameters
----------
foldername : string
Name of the folder from which to load data
"""
if not os.path.isdir(foldername):
raise RuntimeError("Could not find specified foldername for"
+ "load_data:" + str(foldername))
return managed_mcrun.load_results(foldername)
def load_metadata(data_folder_name):
"""
Function that loads metadata from a mcstas simulation
Returns list of metadata objects corresponding to each monitor, all
information is taken from mccode.sim file.
Parameters
----------
first argument : str
path to folder from which metadata should be loaded
"""
return managed_mcrun.load_metadata(data_folder_name)
def load_monitor(metadata, data_folder_name):
"""
Function that loads data given metadata and name of data folder
Loads data for single monitor and returns a McStasData object
Parameters
----------
metadata : McStasMetaData object
McStasMetaData object corresponding to the monitor to be loaded
data_folder_name : str
path to folder from which metadata should be loaded
"""
return managed_mcrun.load_monitor(metadata, data_folder_name)
class Configurator:
"""
Class for setting the configuration file for McStasScript.
Attributes
----------
configuration_file_name : str
absolute path of configuration file
Methods
-------
set_mcstas_path(string)
sets mcstas path
set_mcrun_path(string)
sets mcrun path
set_mcxtrace_path(string)
sets mcxtrace path
set_mxrun_path(string)
sets mxrun path
set_line_length(int)
sets maximum line length to given int
_write_yaml(dict)
internal method, writes a configuration yaml file with dict content
_read_yaml()
internal method, reads a configuration yaml file and returns a dict
_create_new_config_file()
internal method, creates default configuration file
"""
def __init__(self, *args):
"""
Initialization of configurator, checks that the configuration file
actually exists, and if it does not, creates a default configuration
file.
Parameters
----------
(optional) custom name : str
Custom name for configuration file for testing purposes
"""
if len(args) == 1:
name = args[0]
else:
name = "configuration"
# check configuration file exists
THIS_DIR = os.path.dirname(os.path.abspath(__file__))
conf_file = os.path.join(THIS_DIR, "..", name + ".yaml")
self.configuration_file_name = conf_file
if not os.path.isfile(self.configuration_file_name):
# no config file found, write default config file
self._create_new_config_file()
def _write_yaml(self, dictionary):
"""
Writes a dictionary as the new configuration file
"""
with open(self.configuration_file_name, 'w') as yaml_file:
yaml.dump(dictionary, yaml_file, default_flow_style=False)
def _read_yaml(self):
"""
Reads yaml configuration file
"""
with open(self.configuration_file_name, 'r') as ymlfile:
return yaml.safe_load(ymlfile)
def _create_new_config_file(self):
"""
Writes a default configuration file to the package root directory
"""
run = "/usr/bin"
mcstas = "/usr/share/mcstas/resources"
mxrun = "/usr/bin"
mcxtrace = "/usr/share/mcxtrace/resources"
default_paths = {"mcrun_path": run,
"mcstas_path": mcstas,
"mxrun_path": mxrun,
"mcxtrace_path": mcxtrace}
default_other = {"characters_per_line": 85}
default_config = {"paths": default_paths, "other": default_other}
self._write_yaml(default_config)
def set_mcstas_path(self, path):
"""
Sets the path to McStas
Parameters
----------
path : str
Path to the mcstas directory containing "sources", "optics", ...
"""
if not os.path.isdir(path):
raise RuntimeError("Invalid path given to set_mcstas_path:"
+ str(path))
# read entire configuration file
config = self._read_yaml()
# update mcstas_path
config["paths"]["mcstas_path"] = path
# write new configuration file
self._write_yaml(config)
def set_mcrun_path(self, path):
"""
Sets the path to mcrun
Parameters
----------
path : str
Path to the mcrun executable
"""
if not os.path.isdir(path):
raise RuntimeError("Invalid path given to set_mcrun_path:"
+ str(path))
# read entire configuration file
config = self._read_yaml()
# update mcstas_path
config["paths"]["mcrun_path"] = path
# write new configuration file
self._write_yaml(config)
def set_mcxtrace_path(self, path):
"""
Sets the path to McXtrace
Parameters
----------
path : str
Path to the mcxtrace directory containing "sources", "optics", ...
"""
if not os.path.isdir(path):
raise RuntimeError("Invalid path given to set_mcxtrace_path:"
+ str(path))
# read entire configuration file
config = self._read_yaml()
# update mcxtrace_path
config["paths"]["mcxtrace_path"] = path
# write new configuration file
self._write_yaml(config)
def set_mxrun_path(self, path):
"""
Sets the path to mxrun
Parameters
----------
path : str
Path to the mxrun executable
"""
if not os.path.isdir(path):
raise RuntimeError("Invalid path given to set_mxrun_path: "
+ str(path))
# read entire configuration file
config = self._read_yaml()
# update mxrun_path
config["paths"]["mxrun_path"] = path
# write new configuration file
self._write_yaml(config)
def set_line_length(self, line_length):
"""
Sets maximum line length for output
Parameters
----------
line_length : int
maximum line length for output
"""
if not isinstance(line_length, int):
raise ValueError("Given line length in set_line_length not an "
+ "integer.")
if line_length < 1:
raise ValueError("Line length specified in set_line_length must"
+ " be positve, given length: "
+ str(line_length))
# read entire configuration file
config = self._read_yaml()
# update mcstas_path
config["other"]["characters_per_line"] = int(line_length)
# write new configuration file
self._write_yaml(config)
def __repr__(self):
string = "Configurator:\n"
config = self._read_yaml()
if "paths" in config:
string += " paths:\n"
for key, value in config["paths"].items():
string += " " + str(key) + ": " + str(value) + "\n"
if "other" in config:
string += " other:\n"
for key, value in config["other"].items():
string += " " + str(key) + ": " + str(value) + "\n"
return string
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