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.. _manual:
User Manual
===========
If you are new to MNE, consider first reading the :ref:`cookbook`, as it
gives some simple steps for starting with analysis. The other sections provide
more in-depth information about how to use the software.
You can also jump to the :ref:`api_reference` for specific Python function
and class usage information.
.. contents:: Contents
:local:
:depth: 1
.. raw:: html
<h2>Cookbook</h2>
A quick run-through of the basic steps involved in M/EEG source analysis.
.. toctree::
:maxdepth: 2
cookbook
.. raw:: html
<h2>Reading your data</h2>
How to get your raw data loaded in MNE.
.. toctree::
:maxdepth: 1
io
memory
.. raw:: html
<h2>Preprocessing</h2>
Dealing with artifacts and noise sources in data.
.. toctree::
:maxdepth: 1
preprocessing/ica
preprocessing/maxwell
preprocessing/ssp
channel_interpolation
.. raw:: html
<h2>Source localization</h2>
Projecting raw data into source (brain) space.
.. toctree::
:maxdepth: 1
source_localization/forward
source_localization/inverse
source_localization/morph
.. raw:: html
<h2>Time-frequency analysis</h2>
Decomposing time-domain signals into time-frequency representations.
.. toctree::
:maxdepth: 2
time_frequency
.. raw:: html
<h2>Statistics</h2>
Using parametric and non-parametric tests with M/EEG data.
.. toctree::
:maxdepth: 2
statistics
.. raw:: html
<h2>Decoding</h2>
.. toctree::
:maxdepth: 2
decoding
.. raw:: html
<h2>Datasets</h2>
How to use dataset fetchers for public data
.. toctree::
:maxdepth: 2
datasets_index
.. raw:: html
<h2>Migrating</h2>
.. toctree::
:maxdepth: 1
migrating
.. raw:: html
<h2>Pitfalls</h2>
.. toctree::
:maxdepth: 2
pitfalls
.. raw:: html
<h2>C Tools</h2>
Additional information about various MNE-C tools.
.. toctree::
:maxdepth: 1
c_reference
gui/analyze
gui/browse
.. raw:: html
<h2>MATLAB Tools</h2>
Information about the MATLAB toolbox.
.. toctree::
:maxdepth: 2
matlab
.. raw:: html
<h2>Appendices</h2>
More details about our implementations and software.
.. toctree::
:maxdepth: 1
appendix/bem_model
appendix/martinos
appendix/c_misc
appendix/c_release_notes
appendix/c_EULA
|
