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.PHONY: all clean install dev-install test doc
SHELL = /bin/bash -e
WHEELHOUSE?=./wheelhouse
all: install
install:
@which pip > /dev/null
@pip freeze|grep 'pbcommand=='>/dev/null \
&& pip uninstall -y pbcommand \
|| echo -n ''
@pip install ./
clean:
rm -rf build/;\
find . -name "*.egg-info" | xargs rm -rf;\
find . -name "*.pyc" | xargs rm -f;\
find . -name "*.err" | xargs rm -f;\
find . -name "*.log" | xargs rm -f;\
rm -rf dist;\
rm -rf docs/build
rm -f FileTypes.h
test-nose:
nosetests -s --verbose --with-xunit --logging-config log_nose.cfg tests/test_*.py
test-pytest:
pytest -v --durations=12 --junitxml=nosetests.xml --cov=./pbcommand --cov-report=xml:coverage.xml tests/test_*.py
test: test-pytest run-pylint run-pep8
doc:
cd docs && make html
build-tool-contracts:
python -m pbcommand.cli.examples.dev_app --emit-tool-contract > ./tests/data/tool-contracts/pbcommand.tasks.dev_app_tool_contract.json
python -m pbcommand.cli.examples.dev_app --emit-tool-contract > ./tests/data/tool-contracts/dev_example_tool_contract.json
python -m pbcommand.cli.examples.dev_txt_app --emit-tool-contract > ./tests/data/tool-contracts/dev_example_dev_txt_app_tool_contract.json
python -m pbcommand.cli.examples.dev_mixed_app --emit-tool-contract > ./tests/data/tool-contracts/dev_mixed_app_tool_contract.json
python -m pbcommand.cli.examples.dev_gather_fasta_app --emit-tool-contract > ./tests/data/tool-contracts/dev_gather_fasta_app_tool_contract.json
python -m pbcommand.cli.examples.dev_scatter_fasta_app --emit-tool-contract > ./tests/data/tool-contracts/dev_scatter_fasta_app_tool_contract.json
python -m pbcommand.cli.examples.dev_quick_hello_world emit-tool-contracts -o ./tests/data/tool-contracts
run-pylint:
pylint --errors-only pbcommand
run-pep8:
# use xargs to propagate exit code
find pbcommand -name "*.py" | xargs pep8 --ignore=E501,E265,E731,E402,W292
run-auto-pep8:
find pbcommand -name "*.py" -exec autopep8 -i --ignore=E501,E265,E731,E402,W292 {} \;
build-java-classes:
avro-tools compile schema pbcommand/schemas java-classes/
extract-readme-snippets:
rm -rf readme-snippet-*.py
pandoc -t markdown README.md | pandoc --filter ./bin/extract-readme-snippets.py
build-avro-schema-docs:
# this requires nodejs + https://github.com/ept/avrodoc
avrodoc pbcommand/schemas/*.avsc > index.html
cpp-header:
python extras/make_cpp_file_types_header.py FileTypes.h
wheel:
which pip
pip wheel -v --wheel-dir=${WHEELHOUSE} --no-deps .
ls -larth ${WHEELHOUSE}
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