File: reference.dataset.xml

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<?xml version="1.0" encoding="utf-8"?>
<pbds:ReferenceSet 
    xmlns:pbbase="http://pacificbiosciences.com/PacBioBaseDataModel.xsd"  
    xmlns:pbds="http://pacificbiosciences.com/PacBioDatasets.xsd" 
    xmlns="http://pacificbiosciences.com/PacBioDataModel.xsd" 
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" 
    xsi:schemaLocation="http://pacificbiosciences.com/PacBioDataModel.xsd"
    UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe519c" 
    TimeStampedName="referenceset_150304_231155"
    MetaType="PacBio.DataSet.ReferenceSet" 
    Name="DataSet_ReferenceSet" 
    Tags="barcode moreTags mapping mytags" 
    Version="2.3.0" 
    CreatedAt="2015-01-27T09:00:01">
    <pbbase:ExternalResources>
        <pbbase:ExternalResource 
            Name="First References FASTA" 
            Description="Points to an example references FASTA file." 
            UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5293" 
            TimeStampedName="referencefasta_150304_231155"
            MetaType="PacBio.ReferenceFile.ReferenceFastaFile" 
            ResourceId="file:///mnt/path/to/reference.fasta" 
            Tags="Example">
            <pbbase:FileIndices>
                <pbbase:FileIndex 
                    UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5393" 
                    TimeStampedName="sawriter_index_150304_231155"
                    MetaType="PacBio.Index.SaWriterIndex" 
                    ResourceId="file:///mnt/path/to/reference.fasta.sa"/>
                <pbbase:FileIndex 
                    UniqueId="b095d0a3-94b8-4918-b3af-a3f81bbe5493" 
                    TimeStampedName="sam_index_150304_231155"
                    MetaType="PacBio.Index.SamIndex" 
                    ResourceId="file:///mnt/path/to/reference.fasta.fai"/>
            </pbbase:FileIndices>
        </pbbase:ExternalResource>
    </pbbase:ExternalResources>
    <pbds:DataSetMetadata>
        <pbds:TotalLength>5000000</pbds:TotalLength>
        <pbds:NumRecords>500</pbds:NumRecords>
        <pbds:Organism>Tribble</pbds:Organism>
        <pbds:Ploidy>Diploid</pbds:Ploidy>
        <pbds:Contigs>
            <pbds:Contig 
                Name="gi|229359445|emb|AM181176.4|" 
                Description="Pseudomonas fluorescens SBW25 complete genome|quiver" 
                Length="6722109" 
                Digest="f627c795efad7ce0050ed42b942d408e"/>
        </pbds:Contigs>
    </pbds:DataSetMetadata>
</pbds:ReferenceSet>