File: PointCloud_VFHSignature308.pxi

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# -*- coding: utf-8 -*-
# main
cimport pcl_defs as cpp
cimport numpy as cnp

# parts
cimport pcl_features as pclftr
cimport pcl_filters as pclfil
cimport pcl_io as pclio

from libcpp cimport bool
cimport indexing as idx

from boost_shared_ptr cimport sp_assign

cdef class PointCloud_VFHSignature308():
    """Represents a cloud of points in 2-f space.

    A point cloud can be initialized from either a NumPy ndarray of shape
    (n_points, 2), from a list of triples, or from an integer n to create an
    "empty" cloud of n points.

    To load a point cloud from disk, use pcl.load.
    """

    def __cinit__(self, init=None):
        cdef PointCloud_VFHSignature308 other
        
        self._view_count = 0
        
        # TODO: NG --> import pcl --> pyd Error(python shapedptr/C++ shard ptr collusion?)
        # sp_assign(<cpp.shared_ptr[cpp.PointCloud[cpp.PointXYZ]]> self.thisptr_shared, new cpp.PointCloud[cpp.PointXYZ]())
        sp_assign(self.thisptr_shared, new cpp.PointCloud[cpp.PointXYZ]())
        
        if init is None:
            return
        elif isinstance(init, (numbers.Integral, np.integer)):
            self.resize(init)
        elif isinstance(init, np.ndarray):
            self.from_array(init)
        elif isinstance(init, Sequence):
            self.from_list(init)
        elif isinstance(init, type(self)):
            other = init
            self.thisptr()[0] = other.thisptr()[0]
        else:
            raise TypeError("Can't initialize a PointCloud from a %s"
                            % type(init))

    property width:
        """ property containing the width of the point cloud """
        def __get__(self): return self.thisptr().width
    property height:
        """ property containing the height of the point cloud """
        def __get__(self): return self.thisptr().height
    property size:
        """ property containing the number of points in the point cloud """
        def __get__(self): return self.thisptr().size()
    property is_dense:
        """ property containing whether the cloud is dense or not """
        def __get__(self): return self.thisptr().is_dense

    def __repr__(self):
        return "<PointCloud of %d points>" % self.size

    def __releasebuffer__(self, Py_buffer *buffer):
        self._view_count -= 1

    # Pickle support. XXX this copies the entire pointcloud; it would be nice
    # to have an asarray member that returns a view, or even better, implement
    # the buffer protocol (https://docs.python.org/c-api/buffer.html).
    def __reduce__(self):
        return type(self), (self.to_array(),)

    @cython.boundscheck(False)
    def from_array(self, cnp.ndarray[cnp.float32_t, ndim=2] arr not None):
        """
        Fill this object from a 2D numpy array (float32)
        """
        assert arr.shape[1] == 2
        
        cdef cnp.npy_intp npts = arr.shape[0]
        self.resize(npts)
        self.thisptr().width = npts
        self.thisptr().height = 1
        
        cdef cpp.PointXYZ *p
        for i in range(npts):
            p = idx.getptr(self.thisptr(), i)
            p.x, p.y, p.z = arr[i, 0], arr[i, 1], arr[i, 2]

    @cython.boundscheck(False)
    def to_array(self):
        """
        Return this object as a 2D numpy array (float32)
        """
        cdef float x,y,z
        cdef cnp.npy_intp n = self.thisptr().size()
        cdef cnp.ndarray[cnp.float32_t, ndim=2, mode="c"] result
        cdef cpp.PointXYZ *p
        
        result = np.empty((n, 3), dtype=np.float32)
        for i in range(n):
            p = idx.getptr(self.thisptr(), i)
            result[i, 0] = p.x
            result[i, 1] = p.y
            result[i, 2] = p.z
        
        return result

    def from_list(self, _list):
        """
        Fill this pointcloud from a list of 3-tuples
        """
        cdef Py_ssize_t npts = len(_list)
        self.resize(npts)
        self.thisptr().width = npts
        self.thisptr().height = 1
        cdef cpp.PointXYZ* p
        # OK
        # p = idx.getptr(self.thisptr(), 1)
        # enumerate ? -> i -> type unknown
        for i, l in enumerate(_list):
             p = idx.getptr(self.thisptr(), <int> i)
             p.x, p.y, p.z = l

    def to_list(self):
        """
        Return this object as a list of 3-tuples
        """
        return self.to_array().tolist()

    def resize(self, cnp.npy_intp x):
        if self._view_count > 0:
            raise ValueError("can't resize PointCloud while there are"
                             " arrays/memoryviews referencing it")
        self.thisptr().resize(x)

    def get_point(self, cnp.npy_intp row, cnp.npy_intp col):
        """
        Return a point (3-tuple) at the given row/column
        """
        cdef cpp.PointXYZ *p = idx.getptr_at2(self.thisptr(), row, col)
        return p.x, p.y, p.z

    def __getitem__(self, cnp.npy_intp nmidx):
        cdef cpp.PointXYZ *p = idx.getptr_at(self.thisptr(), nmidx)
        return p.x, p.y, p.z

    def extract(self, pyindices, bool negative=False):
        """
        Given a list of indices of points in the pointcloud, return a 
        new pointcloud containing only those points.
        """
        cdef PointCloud result
        cdef cpp.PointIndices_t *ind = new cpp.PointIndices_t()
        
        for i in pyindices:
            ind.indices.push_back(i)
        
        result = PointCloud()
        # (<cpp.PointCloud[cpp.PointXYZ]> deref(self.thisptr())
        mpcl_extract(self.thisptr_shared, result.thisptr(), ind, negative)
        # XXX are we leaking memory here? del ind causes a double free...
        
        return result
###