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import numpy as np
import periodictable as pt
from periodictable.activation import Sample, ActivationEnvironment
from periodictable.activation import IAEA1987_isotopic_abundance, table_abundance
def test():
# This is not a very complete test of the activation calculator.
# Mostly just a smoke test to see that things run and produce the
# same answers as before. The target values have been checked
# against the NCNR internal activation calculator spreadsheet. The
# values herein differ slightly from the spreadsheet since we are using
# different tables for materials and different precision on our
# constants. There has also been some small corrections to the
# formulas over time.
def _get_Au_activity(fluence=1e5):
sample = Sample('Au', mass=1)
env = ActivationEnvironment(fluence=fluence)
sample.calculate_activation(env, rest_times=[0])
for product, activity in sample.activity.items():
if str(product.daughter) == 'Au-198':
return activity[0]
else:
raise RuntimeError("missing activity from Au-198")
# Activity scales linearly with fluence and mass
act1 = _get_Au_activity(fluence=1e5)
act2 = _get_Au_activity(fluence=1e8)
#print(f"Au: {act1} x 1000 = {act2}")
assert (act2 - 1000*act1) < 1e-8
# Smoke test: does every element run to completion?
formula = "".join(str(el) for el in pt.elements)
# Use an enormous mass to force significant activation of rare isotopes
mass, fluence, exposure = 1e15, 1e8, 10
env = ActivationEnvironment(fluence=fluence, Cd_ratio=70, fast_ratio=50, location="BT-2")
sample = Sample(formula, mass=mass)
sample.calculate_activation(
env, exposure=exposure, rest_times=(0, 1, 24),
abundance=IAEA1987_isotopic_abundance,
#abundance=table_abundance,
)
#sample.show_table(cutoff=0)
sample = Sample('Co', mass=10)
env = ActivationEnvironment(fluence=1e8)
sample.calculate_activation(
env, rest_times=[0, 1, 24],
abundance=IAEA1987_isotopic_abundance,
#abundance=table_abundance,
)
#sample.show_table(cutoff=0)
# ACT_2N_X.xls for 10g Co at Io=1e8 for t = [0, 1, 24]
# There are duplicate entries for Co-61 because there are different
# activation paths for 59Co + n -> 61Co.
# Results are limited to 3 digits because formulas use ln(2) = 0.693. There
# is also precision loss on the calculation of differences in exponentials,
# with exp(a) - exp(b) converted to exp(b)(exp(a-b) - 1) = exp(b)expm1(a-b)
# in activation.py.
# results = {
# "C0-60m+": [5.08800989419543E+03, 9.69933141298983E+01, 2.69898447909379E-38],
# "Co-61": [7.30937687202485E-09, 4.80260282859366E-09, 3.06331725449002E-13],
# "Co-60": [1.55042700053951E-01, 1.55040373560730E-01, 1.54986873850802E-01],
# "Co-61": [1.36469792582999E-09, 8.96670432174800E-10, 5.71936948464344E-14],
# }
# Results from R2.0.0-pre
results = {
"Co-60m+": [5.08746786932552e+03, 9.69014499692868e+01, 2.64477047705988e-38],
"Co-61": [7.30866736559643e-09, 4.80170831653643e-09, 3.05646958051663e-13],
"Co-60": [1.55056574647797e-01, 1.55054247452235e-01, 1.55000731593431e-01],
"Co-61": [1.36478223029061e-09, 8.96645839472098e-10, 5.70749106813738e-14],
}
#print(list(sample.activity.keys()))
#print(" ".join(k for k in dir(list(sample.activity.keys())[0]) if k[0] != '_'))
#print(list(sample.activity.keys())[0].__dict__)
for product, activity in sample.activity.items():
#print(product)
#print(dir(product))
# Uncomment to show new table values
activity_str = ",\t".join(f"{Ia:.14E}" for Ia in activity)
#print(f' "{product.daughter}":\t[{activity_str}],')
assert product.daughter in results, f"Missing {product.daughter}"
# TODO: include duplicate decay paths in test, or identical daughters
# Test that results haven't changed since last update
if product.daughter != "Co-61":
assert np.allclose(results[product.daughter], activity, atol=0, rtol=1e-12)
# 129-I has a long half-life (16 My) so any combination of exposure
# fluence and mass that causes significant activation will yield a product
# that is radioactive for a very long time.
sample = Sample('Te', mass=1e13)
env = ActivationEnvironment(fluence=1e8)
sample.calculate_activation(env, rest_times=[1,10,100])
#sample.show_table(cutoff=0)
target = 1e-5
t_decay = sample.decay_time(target)
#print(f"{t_decay=}")
sample.calculate_activation(env, rest_times=[t_decay])
total = sum(v[-1] for v in sample.activity.values())
assert abs(total - target) < 1e-10, f"total activity {total} != {target}"
# Al and Si daughters have short half-lives
sample = Sample('AlSi', mass=1e3)
env = ActivationEnvironment(fluence=1e8)
sample.calculate_activation(env, rest_times=[100,200])
#sample.show_table(cutoff=0)
target = 1e-5
t_decay = sample.decay_time(target)
#print(f"{t_decay=}")
sample.calculate_activation(env, rest_times=[t_decay])
total = sum(v[-1] for v in sample.activity.values())
assert abs(total - target) < 1e-10, f"total activity {total} != {target}"
#print()
if 0: # TODO: doesn't work for high fluence
# Test high fluence
sample = Sample('Al2O3', mass=1e3)
sample = Sample('Al', mass=1e3)
flow, scale = 1e16, 1e2
rest_times = [0, 10]
env = ActivationEnvironment(fluence=flow*scale)
sample.calculate_activation(env, rest_times=rest_times)
sample.show_table(cutoff=0)
ahigh = list(sample.activity.values())
env = ActivationEnvironment(fluence=flow)
sample.calculate_activation(env, rest_times=rest_times)
sample.show_table(cutoff=0)
alow = np.asarray(list(sample.activity.values()))
for alow_k, ahigh_k in zip(alow, ahigh):
#print(f"{alow_k=} {ahigh_k=}")
assert np.allclose(alow_k*scale, ahigh_k), f"scaling fails at {alow_k=} {ahigh_k=}"
test()
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