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"""
Module for handling paths.
This is kept separate from helpers module in order to avoid circular imports in
setting the bedtools path.
"""
import pybedtools
from pybedtools import bedtool
from . import settings
from importlib import reload
def _set_bedtools_path(path=""):
old_path = settings._bedtools_path
settings._bedtools_path = path
if old_path != path:
reload(bedtool)
reload(pybedtools)
return True
def _get_bedtools_path():
return settings._bedtools_path
def _set_R_path(path=""):
settings._R_path = path
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