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#!/usr/bin/make -f
DH_VERBOSE := 1
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
export PYBUILD_NAME=pybedtools
export MATPLOTLIBRC=$(CURDIR)/debian/
#export PYBUILD_TEST_ARGS=--attr '!url'
export PYBUILD_BEFORE_TEST=cp {dir}/debian/mpl-expected.png {build_dir}/pybedtools/test/ ; python3 {dir}/setup.py install --user ; export HOME=$(CURDIR)/fakehome
export PYBUILD_TEST_ARGS=-v --doctest-modules
export PYBUILD_AFTER_TEST=cd {dir}/docs ; make clean doctest
export PYBUILD_DISABLE=test # tests aren't passing upstream
export HOME=$(CURDIR)/fakehome
export PATH:=$(PATH):$(HOME)/.local/bin
%:
dh $@ --with python3,sphinxdoc --buildsystem=pybuild
override_dh_auto_build:
python3 setup.py cythonize
dh_auto_build
python3 setup.py develop --user
python3 setup.py build_sphinx
override_dh_install:
dh_install
rm -f debian/python3-pybedtools/usr/lib/python3*/dist-packages/pybedtools/test/prevent_open_file_regression
mkdir -p debian/pybedtools-bin/usr/bin
mkdir -p debian/pybedtools-bin/usr/share/doc/pybedtools-bin/examples
mv debian/python3-pybedtools/usr/bin/*example* debian/pybedtools-bin/usr/share/doc/pybedtools-bin/examples
mv debian/python3-pybedtools/usr/bin/* debian/pybedtools-bin/usr/bin/
rm -fr debian/python3-pybedtools/usr/bin
override_dh_auto_clean:
/bin/rm -rf fakehome .eggs .pybuild
/bin/rm -rf debian/python3-pybedtools debian/files
/bin/rm -rf pybedtools.egg-info
/bin/rm -rf pybedtools/scripts/__pycache__/
/bin/rm -rf pybedtools/contrib/__pycache__/
/bin/rm -rf pybedtools/__pycache__/
find pybedtools -name "*.so" -o -name "*.o" | xargs -r rm
rm -rf build
/bin/rm -rf pybedtools/cbedtools.cpp pybedtools/featurefuncs.cpp
find docs/source/autodocs/ -name "*.rst" | xargs -r /bin/rm
# dh_auto_clean
override_dh_fixperms-arch:
dh_fixperms -a
chmod -x debian/*/usr/lib/python3/dist-packages/pybedtools/scripts/pybedtools
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