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# Example config file, in YAML format, for use with the ConfiguredBedToolsDemo
# class. This provides a one-stop-shop "styling" mechanism for many similar
# operations (say, when documenting the tools themselves....)
#
# Optional data path. If you want to use files that ship with pybedtools, call
# the ConfiguredBedToolsDemo constructor with
# data_path=pybedtools.example_filename("")
data_path:
# config: a list of 2-tuples.
#
# **WARNING**
# This is really ugly, the purpose is to show how to use different parameters
# for demonstration!
config:
# First 2-tuple in the list:
-
# Sub-item 1 is the filename. If "data_path" key is provided, that will be
# prepended to the filename at runtime
- a.bed
# Sub-item 2 contains the config info for a Track object.
-
stranded:
"+": b
"-": r
alpha: 0.3
visibility: squish
label: a.bed
# Second 2-tuple in the list:
-
- b.bed
-
stranded: True
alpha: 0.3
visibility: squish
label: b.bed
# Any results will be styled like this
result_kwargs:
alpha: 0.8
color: "#dd9922"
visibility: squish
label: result
# title tweak
title_kwargs:
size: 10
# subplots tweak
subplots_adjust:
top: 0.8
# size tweak
figsize: [11, 2]
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