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import os
import pathlib
import six
import pybedtools
import pytest
def test_pathlib_base():
file = "a.bed"
fn = os.path.join(pybedtools.filenames.data_dir(), file)
path = pathlib.PurePath(fn)
assert pybedtools.BedTool(path).fn == fn
def test_pathlib_derived():
file = "a.bed"
fn = os.path.join(pybedtools.filenames.data_dir(), file)
path = pathlib.Path(fn)
assert pybedtools.BedTool(path).fn == fn
# this may be unnecessary, as the check is performed after str conversion
def test_pathlib_nonexistent_file():
fn = os.path.join(pybedtools.filenames.data_dir(), "this_file_is_missing")
path = pathlib.Path(fn)
if six.PY2:
with pytest.raises(ValueError):
pybedtools.BedTool(path)
else:
with pytest.raises(FileNotFoundError):
pybedtools.BedTool(path)
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