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from setuptools import setup
from io import open
import sys
install_requires = ['six', 'setuptools >= 0.7']
if sys.version_info[0] == 2 and sys.version_info[1] == 6:
install_requires.extend(['ordereddict', 'argparse'])
def get_version(string):
""" Parse the version number variable __version__ from a script. """
import re
version_re = r"^__version__ = ['\"]([^'\"]*)['\"]"
version_str = re.search(version_re, string, re.M).group(1)
return version_str
setup(
name='pyfaidx',
provides='pyfaidx',
version=get_version(open('pyfaidx/__init__.py', encoding='utf-8').read()),
author='Matthew Shirley',
author_email='mdshw5@gmail.com',
url='http://mattshirley.com',
description='pyfaidx: efficient pythonic random '
'access to fasta subsequences',
long_description=open('README.rst', encoding='utf-8').read(),
license='BSD',
packages=['pyfaidx'],
install_requires=install_requires,
entry_points={'console_scripts': ['faidx = pyfaidx.cli:main']},
classifiers=[
"Development Status :: 5 - Production/Stable",
"License :: OSI Approved :: BSD License",
"Environment :: Console",
"Intended Audience :: Science/Research",
"Natural Language :: English",
"Operating System :: Unix",
"Programming Language :: Python :: 3.5",
"Programming Language :: Python :: 3.4",
"Programming Language :: Python :: 3.3",
"Programming Language :: Python :: 3.2",
"Programming Language :: Python :: 2.7",
"Programming Language :: Python :: 2.6",
"Programming Language :: Python :: Implementation :: PyPy",
"Topic :: Scientific/Engineering :: Bio-Informatics"
]
)
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