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.. pymbar documentation master file, created by
sphinx-quickstart on Mon May 5 19:35:19 2014.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
pymbar
======
Python implementation of the `multistate Bennett acceptance ratio (MBAR) <http://www.alchemistry.org/wiki/Multistate_Bennett_Acceptance_Ratio>`_ method for estimating expectations and free energy differences
Documentation
-------------
.. toctree::
:maxdepth: 2
getting_started
moving_from_pymbar3
strategies_for_solution
mbar
fes_with_pymbar
other_estimators
timeseries
utils
zbibliography
Indices and tables
==================
* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
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