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# -*- coding: utf-8 -*-
###############################################################
# PyNLPl - WordAlignment Library for reading GIZA++ A3 files
# by Maarten van Gompel (proycon)
# http://ilk.uvt.nl/~mvgompel
# Induction for Linguistic Knowledge Research Group
# Universiteit van Tilburg
#
# In part using code by Sander Canisius
#
# Licensed under GPLv3
#
#
# This library reads GIZA++ A3 files. It contains three classes over which
# you can iterate to obtain (sourcewords,targetwords,alignment) pairs.
#
# - WordAlignment - Reads target-source.A3.final files, in which each source word is aligned to one target word
# - MultiWordAlignment - Reads source-target.A3.final files, in which each source word may be aligned to multiple target target words
# - IntersectionAlignment - Computes the intersection between the above two alignments
#
#
###############################################################
from __future__ import print_function
from __future__ import unicode_literals
from __future__ import division
from __future__ import absolute_import
from pynlpl.common import u
import bz2
import gzip
import copy
import io
from sys import stderr
class GizaSentenceAlignment(object):
def __init__(self, sourceline, targetline, index):
self.index = index
self.alignment = []
if sourceline:
self.source = self._parsesource(sourceline.strip())
else:
self.source = []
self.target = targetline.strip().split(' ')
def _parsesource(self, line):
cleanline = ""
inalignment = False
begin = 0
sourceindex = 0
for i in range(0,len(line)):
if line[i] == ' ' or i == len(line) - 1:
if i == len(line) - 1:
offset = 1
else:
offset = 0
word = line[begin:i+offset]
if word == '})':
inalignment = False
begin = i + 1
continue
elif word == "({":
inalignment = True
begin = i + 1
continue
if word.strip() and word != 'NULL':
if not inalignment:
sourceindex += 1
if cleanline: cleanline += " "
cleanline += word
else:
targetindex = int(word)
self.alignment.append( (sourceindex-1, targetindex-1) )
begin = i + 1
return cleanline.split(' ')
def intersect(self,other):
if other.target != self.source:
print("GizaSentenceAlignment.intersect(): Mismatch between self.source and other.target: " + repr(self.source) + " -- vs -- " + repr(other.target),file=stderr)
return None
intersection = copy.copy(self)
intersection.alignment = []
for sourceindex, targetindex in self.alignment:
for targetindex2, sourceindex2 in other.alignment:
if targetindex2 == targetindex and sourceindex2 == sourceindex:
intersection.alignment.append( (sourceindex, targetindex) )
return intersection
def __repr__(self):
s = " ".join(self.source)+ " ||| "
s += " ".join(self.target) + " ||| "
for S,T in sorted(self.alignment):
s += self.source[S] + "->" + self.target[T] + " ; "
return s
def getalignedtarget(self, index):
"""Returns target range only if source index aligns to a single consecutive range of target tokens."""
targetindices = []
target = None
foundindex = -1
for sourceindex, targetindex in self.alignment:
if sourceindex == index:
targetindices.append(targetindex)
if len(targetindices) > 1:
for i in range(1,len(targetindices)):
if abs(targetindices[i] - targetindices[i-1]) != 1:
break # not consecutive
foundindex = (min(targetindices), max(targetindices))
target = ' '.join(self.target[min(targetindices):max(targetindices)+1])
elif targetindices:
foundindex = targetindices[0]
target = self.target[foundindex]
return target, foundindex
class GizaModel(object):
def __init__(self, filename, encoding= 'utf-8'):
if filename.split(".")[-1] == "bz2":
self.f = bz2.BZ2File(filename,'r')
elif filename.split(".")[-1] == "gz":
self.f = gzip.GzipFile(filename,'r')
else:
self.f = io.open(filename,'r',encoding=encoding)
self.nextlinebuffer = None
def __iter__(self):
self.f.seek(0)
nextlinebuffer = u(next(self.f))
sentenceindex = 0
done = False
while not done:
sentenceindex += 1
line = nextlinebuffer
if line[0] != '#':
raise Exception("Error parsing GIZA++ Alignment at sentence " + str(sentenceindex) + ", expected new fragment, found: " + repr(line))
targetline = u(next(self.f))
sourceline = u(next(self.f))
yield GizaSentenceAlignment(sourceline, targetline, sentenceindex)
try:
nextlinebuffer = u(next(self.f))
except StopIteration:
done = True
def __del__(self):
if self.f: self.f.close()
#------------------ OLD -------------------
def parseAlignment(tokens): #by Sander Canisius
assert tokens.pop(0) == "NULL"
while tokens.pop(0) != "})":
pass
while tokens:
word = tokens.pop(0)
assert tokens.pop(0) == "({"
positions = []
token = tokens.pop(0)
while token != "})":
positions.append(int(token))
token = tokens.pop(0)
yield word, positions
class WordAlignment:
"""Target to Source alignment: reads target-source.A3.final files, in which each source word is aligned to one target word"""
def __init__(self,filename, encoding=False):
"""Open a target-source GIZA++ A3 file. The file may be bzip2 compressed. If an encoding is specified, proper unicode strings will be returned"""
if filename.split(".")[-1] == "bz2":
self.stream = bz2.BZ2File(filename,'r')
else:
self.stream = open(filename)
self.encoding = encoding
def __del__(self):
self.stream.close()
def __iter__(self): #by Sander Canisius
line = self.stream.readline()
while line:
assert line.startswith("#")
src = self.stream.readline().split()
trg = []
alignment = [None for i in xrange(len(src))]
for i, (targetWord, positions) in enumerate(parseAlignment(self.stream.readline().split())):
trg.append(targetWord)
for pos in positions:
assert alignment[pos - 1] is None
alignment[pos - 1] = i
if self.encoding:
yield [ u(w,self.encoding) for w in src ], [ u(w,self.encoding) for w in trg ], alignment
else:
yield src, trg, alignment
line = self.stream.readline()
def targetword(self, index, targetwords, alignment):
"""Return the aligned targetword for a specified index in the source words"""
if alignment[index]:
return targetwords[alignment[index]]
else:
return None
def reset(self):
self.stream.seek(0)
class MultiWordAlignment:
"""Source to Target alignment: reads source-target.A3.final files, in which each source word may be aligned to multiple target words (adapted from code by Sander Canisius)"""
def __init__(self,filename, encoding = False):
"""Load a target-source GIZA++ A3 file. The file may be bzip2 compressed. If an encoding is specified, proper unicode strings will be returned"""
if filename.split(".")[-1] == "bz2":
self.stream = bz2.BZ2File(filename,'r')
else:
self.stream = open(filename)
self.encoding = encoding
def __del__(self):
self.stream.close()
def __iter__(self):
line = self.stream.readline()
while line:
assert line.startswith("#")
trg = self.stream.readline().split()
src = []
alignment = []
for i, (word, positions) in enumerate(parseAlignment(self.stream.readline().split())):
src.append(word)
alignment.append( [ p - 1 for p in positions ] )
if self.encoding:
yield [ unicode(w,self.encoding) for w in src ], [ unicode(w,self.encoding) for w in trg ], alignment
else:
yield src, trg, alignment
line = self.stream.readline()
def targetword(self, index, targetwords, alignment):
"""Return the aligned targeword for a specified index in the source words. Multiple words are concatenated together with a space in between"""
return " ".join(targetwords[alignment[index]])
def targetwords(self, index, targetwords, alignment):
"""Return the aligned targetwords for a specified index in the source words"""
return [ targetwords[x] for x in alignment[index] ]
def reset(self):
self.stream.seek(0)
class IntersectionAlignment:
def __init__(self,source2target,target2source,encoding=False):
self.s2t = MultiWordAlignment(source2target, encoding)
self.t2s = WordAlignment(target2source, encoding)
self.encoding = encoding
def __iter__(self):
for (src, trg, alignment), (revsrc, revtrg, revalignment) in zip(self.s2t,self.t2s): #will take unnecessary memory in Python 2.x, optimal in Python 3
if src != revsrc or trg != revtrg:
raise Exception("Files are not identical!")
else:
#keep only those alignments that are present in both
intersection = []
for i, x in enumerate(alignment):
if revalignment[i] in x:
intersection.append(revalignment[i])
else:
intersection.append(None)
yield src, trg, intersection
def reset(self):
self.s2t.reset()
self.t2s.reset()
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