File: test_ROI.py

package info (click to toggle)
python-pyqtgraph 0.13.7-6
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 8,072 kB
  • sloc: python: 54,043; makefile: 127; ansic: 40; sh: 2
file content (472 lines) | stat: -rw-r--r-- 12,237 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
import math
import platform

import numpy as np
import pytest
from packaging.version import Version, parse

import pyqtgraph as pg
from pyqtgraph.Qt import QtCore, QtGui, QtTest
from tests.image_testing import assertImageApproved
from tests.ui_testing import mouseClick, mouseDrag, mouseMove, resizeWindow

app = pg.mkQApp()
pg.setConfigOption("mouseRateLimit", 0)


@pytest.mark.parametrize("roi, name", [
        (pg.ROI([1, 1],        [27, 28], pen='y', antialias=False), 'baseroi'),
        (pg.RectROI([1, 1],    [27, 28], pen='y', antialias=False), 'rectroi'),
        (pg.EllipseROI([1, 1], [27, 28], pen='y', antialias=False), 'ellipseroi'),
        (
            pg.PolyLineROI(
                [[0, 0], [27, 0], [0, 28]],
                closed=True,
                pos=(1, 1),
                antialias=False
            ),'polylineroi'
        ),
    ]
)
@pytest.mark.parametrize("transpose", [True, False])
def test_getArrayRegion(roi, name, transpose):    
    # For some ROIs, resize should not be used.
    testResize = not isinstance(roi, pg.PolyLineROI)

    origMode = pg.getConfigOption('imageAxisOrder')
    try:
        pg.setConfigOptions(
            imageAxisOrder='row-major' if transpose else 'col-major'
        )
        check_getArrayRegion(
            roi, f"roi/{name}",
            testResize,
            transpose=transpose
        )
    finally:
        pg.setConfigOptions(imageAxisOrder=origMode)


def check_getArrayRegion(roi, name, testResize=True, transpose=False):
    # edges corner pixels seem to be slightly different on windows
    if (
        isinstance(roi, (pg.ROI, pg.RectROI))
        and platform.system() == "Windows"
    ):
        pxCount = 1
    else:
        pxCount = -1

    initState = roi.getState()
    win = pg.GraphicsView()
    win.show()
    resizeWindow(win, 200, 400)
    # Don't use Qt's layouts for testing--these generate unpredictable results.
    # Instead, manually place the ViewBoxes
    vb1 = pg.ViewBox()
    win.scene().addItem(vb1)
    vb1.setPos(6, 6)
    vb1.resize(188, 191)

    vb2 = pg.ViewBox()
    win.scene().addItem(vb2)
    vb2.setPos(6, 203)
    vb2.resize(188, 191)

    img1 = pg.ImageItem(border='w')
    img2 = pg.ImageItem(border='w')

    vb1.addItem(img1)
    vb2.addItem(img2)

    np.random.seed(0)
    data = np.random.normal(size=(7, 30, 31, 5))
    data[0, :, :, :] += 10
    data[:, 1, :, :] += 10
    data[:, :, 2, :] += 10
    data[:, :, :, 3] += 10

    if transpose:
        data = data.transpose(0, 2, 1, 3)

    img1.setImage(data[0, ..., 0])
    vb1.setAspectLocked()
    vb1.enableAutoRange(True, True)

    roi.setZValue(10)
    vb1.addItem(roi)

    if isinstance(roi, pg.RectROI):
        first_arg = [28.0, 27.0] if transpose else [27.0, 28.0]
        assert roi.getAffineSliceParams(
            data,
            img1,
            axes=(1, 2)
        ) == (first_arg, ((1.0, 0.0), (0.0, 1.0)), (1.0, 1.0))


    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    # assert np.all((rgn == data[:, 1:-2, 1:-2, :]) | (rgn == 0))
    img2.setImage(rgn[0, ..., 0])
    vb2.setAspectLocked()
    vb2.enableAutoRange(True, True)

    app.processEvents()
    assertImageApproved(
        win,
        f'{name}/roi_getarrayregion',
        'Simple ROI region selection.',
        pxCount=pxCount
    )

    with pytest.raises(TypeError):
        roi.setPos(0, False)

    roi.setPos([0.5, 1.5])
    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    img2.setImage(rgn[0, ..., 0])
    app.processEvents()
    assertImageApproved(
        win, 
        f'{name}/roi_getarrayregion_halfpx',
        'Simple ROI region selection, 0.5 pixel shift.',
        pxCount=pxCount
    )

    roi.setAngle(45)
    roi.setPos([3, 0])
    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    img2.setImage(rgn[0, ..., 0])
    app.processEvents()
    assertImageApproved(
        win, 
        f'{name}/roi_getarrayregion_rotate',
        'Simple ROI region selection, rotation.',
        pxCount=pxCount
    )

    if testResize:
        roi.setSize([60, 60])
        rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
        img2.setImage(rgn[0, ..., 0])
        app.processEvents()
        assertImageApproved(
            win, 
            f'{name}/roi_getarrayregion_resize',
            'Simple ROI region selection, resized.',
            pxCount=pxCount
        )

    img1.setPos(0, img1.height())
    img1.setTransform(QtGui.QTransform().scale(1, -1).rotate(20), True)
    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    img2.setImage(rgn[0, ..., 0])
    app.processEvents()
    assertImageApproved(
        win,
        f'{name}/roi_getarrayregion_img_trans',
        'Simple ROI region selection, image transformed.',
        pxCount=pxCount
    )

    vb1.invertY()
    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    img2.setImage(rgn[0, ..., 0])
    app.processEvents()
    assertImageApproved(
        win, 
        f'{name}/roi_getarrayregion_inverty',
        'Simple ROI region selection, view inverted.',
        pxCount=pxCount
    )

    roi.setState(initState)
    img1.setPos(0, 0)
    img1.setTransform(QtGui.QTransform.fromScale(1, 0.5))
    rgn = roi.getArrayRegion(data, img1, axes=(1, 2))
    img2.setImage(rgn[0, ..., 0])
    app.processEvents()
    assertImageApproved(
        win, 
        f'{name}/roi_getarrayregion_anisotropic',
        'Simple ROI region selection, image scaled anisotropically.',
        pxCount=pxCount
    )
    # allow the roi to be re-used
    roi.scene().removeItem(roi)
    win.hide()


def test_mouseClickEvent():
    plt = pg.GraphicsView()
    plt.show()
    resizeWindow(plt, 200, 200)
    vb = pg.ViewBox()
    plt.scene().addItem(vb)
    vb.resize(200, 200)
    QtTest.QTest.qWaitForWindowExposed(plt)
    QtTest.QTest.qWait(100)

    roi = pg.RectROI((0, 0), (10, 20), removable=True)
    vb.addItem(roi)
    app.processEvents()

    mouseClick(
        plt,
        roi.mapToScene(pg.Point(2, 2)),
        QtCore.Qt.MouseButton.LeftButton
    )


def test_mouseDragEventSnap():
    pg.setConfigOptions(antialias=False)
    plt = pg.GraphicsView()
    plt.show()
    resizeWindow(plt, 200, 200)
    vb = pg.ViewBox()
    plt.scene().addItem(vb)
    vb.resize(200, 200)
    QtTest.QTest.qWaitForWindowExposed(plt)
    QtTest.QTest.qWait(100)

    # A Rectangular roi with scaleSnap enabled
    initial_x = 20
    initial_y = 20
    roi = pg.RectROI(
        (initial_x, initial_y),
        (20, 20),
        scaleSnap=True,
        translateSnap=True,
        snapSize=1.0,
        movable=True
    )
    vb.addItem(roi)
    app.processEvents()

    # Snap size roundtrip
    assert roi.snapSize == 1.0
    roi.snapSize = 0.2
    assert roi.snapSize == 0.2
    roi.snapSize = 1.0
    assert roi.snapSize == 1.0

    # Snap position check
    snapped = roi.getSnapPosition(pg.Point(2.5, 3.5), snap=True)
    assert snapped == pg.Point(2.0, 4.0)

    # Only drag in y direction
    roi_position = roi.mapToView(pg.Point(initial_x, initial_y))
    mouseDrag(
        plt,
        roi_position,
        roi_position + pg.Point(0, 10),
        QtCore.Qt.MouseButton.LeftButton
    )
    assert roi.pos() == pg.Point(initial_x, 19)

    mouseDrag(
        plt,
        roi_position,
        roi_position + pg.Point(0, 10),
        QtCore.Qt.MouseButton.LeftButton
    )
    assert roi.pos() == pg.Point(initial_x, 18)

    # Only drag in x direction
    mouseDrag(
        plt,
        roi_position,
        roi_position + pg.Point(10, 0),
        QtCore.Qt.MouseButton.LeftButton
    )
    assert roi.pos() == pg.Point(21, 18)

@pytest.mark.parametrize("roi, name", [
        (
            pg.PolyLineROI(
                [[0, 0], [10, 0], [0, 15]],
                closed=True,
                pen=0.3,
                antialias=False
            ),
            'closed'
        ),
        (
            pg.PolyLineROI(
                [[0, 0], [10, 0], [0, 15]],
                closed=False,
                pen=0.3,
                antialias=False 
            ),
            'open'
        )
    ]
)
def test_PolyLineROI(roi, name):
    plt = pg.GraphicsView()
    plt.show()
    resizeWindow(plt, 200, 200)
    vb = pg.ViewBox()
    plt.scene().addItem(vb)
    vb.resize(200, 200)
    # plt.plotItem = pg.PlotItem()
    # plt.scene().addItem(plt.plotItem)
    # plt.plotItem.resize(200, 200)

    plt.scene().minDragTime = 0  # let us simulate mouse drags very quickly.

    # seemingly arbitrary requirements; might need longer wait time for some
    # platforms..
    QtTest.QTest.qWaitForWindowExposed(plt)
    QtTest.QTest.qWait(100)

    vb.clear()
    vb.addItem(roi)
    vb.autoRange()
    app.processEvents()

    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_init',
        f'Init {name} polyline.'
    )
    initState = roi.getState()
    assert len(roi.getState()['points']) == 3

    # hover over center
    center = roi.mapToScene(pg.Point(3, 3))
    mouseMove(plt, center)
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_hover_roi',
        'Hover mouse over center of ROI.'
    )

    # drag ROI
    mouseDrag(
        plt,
        center, center + pg.Point(10, -10),
        QtCore.Qt.MouseButton.LeftButton
    )
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_drag_roi',
        'Drag mouse over center of ROI.'
    )

    # hover over handle
    pt = roi.mapToScene(
        pg.Point(roi.getState()['points'][2])
    )
    mouseMove(plt, pt)
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_hover_handle',
        'Hover mouse over handle.'
    )

    # drag handle
    mouseDrag(plt,
        pt,
        pt + pg.Point(5, 20),
        QtCore.Qt.MouseButton.LeftButton
    )
    
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_drag_handle',
        'Drag mouse over handle.'
    )

    # hover over segment
    pt = roi.mapToScene(
        (
            pg.Point(roi.getState()['points'][2]) + 
            pg.Point(roi.getState()['points'][1])
        ) * 0.5
    )

    mouseMove(plt, pt + pg.Point(0, 2))
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_hover_segment',
        'Hover mouse over diagonal segment.'
    )

    # click segment
    mouseClick(plt, pt, QtCore.Qt.MouseButton.LeftButton)
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_click_segment',
        'Click mouse over segment.',
        pxCount=3
    )

    # drag new handle
    mouseMove(plt, pt + pg.Point(10, -10))
    # pg bug: have to move the mouse off/on again to register hover
    mouseDrag(
        plt,
        pt, pt + pg.Point(10, -10),
        QtCore.Qt.MouseButton.LeftButton
    )

    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_drag_new_handle',
        'Drag mouse over created handle.',
        pxCount=2
    )

    # clear all points
    roi.clearPoints()
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_clear',
        'All points cleared.'
    )
    assert len(roi.getState()['points']) == 0

    # call setPoints
    roi.setPoints(initState['points'])
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_setpoints',
        'Reset points to initial state.',
    )
    assert len(roi.getState()['points']) == 3

    # call setState
    roi.setState(initState)
    assertImageApproved(
        plt,
        f'roi/polylineroi/{name}_setstate',
        'Reset ROI to initial state.'
    )
    assert len(roi.getState()['points']) == 3

    plt.hide()


@pytest.mark.parametrize("p1,p2", [
    ((1, 1), (2, 5)),
    ((0.1, 0.1), (-1, 5)),
    ((3, -1), (5, -6)),
    ((-2, 1), (-4, -8)),
])
def test_LineROI_coords(p1, p2):
    pg.setConfigOptions(antialias=False)
    pw = pg.PlotWidget()
    pw.show()

    lineroi = pg.LineROI(p1, p2, width=0.5, pen="r")
    pw.addItem(lineroi)

    # first two handles are the scale-rotate handles positioned by pos1, pos2
    for expected, (_, scenepos) in zip(
        [p1, p2],
        lineroi.getSceneHandlePositions()
    ):
        got = lineroi.mapSceneToParent(scenepos)
        assert math.isclose(got.x(), expected[0])
        assert math.isclose(got.y(), expected[1])