File: htslib-external-config.patch

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python-pysam 0.10.0%2Bds-2
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Description: Do not use internal htslib library
Author: Afif Elghraoui <afif@debian.org>
Forwarded: not-needed
Last-Update: 2017-01-26
--- python-pysam.orig/setup.py
+++ python-pysam/setup.py
@@ -255,7 +255,7 @@
 else:
     raise ValueError("unknown HTSLIB value '%s'" % HTSLIB_MODE)
 
-internal_htslib_libraries = [os.path.splitext("chtslib{}".format(sysconfig.get_config_var('SO')))[0]]
+internal_htslib_libraries = []
 
 # build config.py
 with open(os.path.join("pysam", "config.py"), "w") as outf: