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Description: Disable setting rpath
Author: Afif Elghraoui <afif@debian.org>
Forwarded: not-needed
Last-Update: 2016-03-05
--- python-pysam.orig/cy_build.py
+++ python-pysam/cy_build.py
@@ -57,7 +57,7 @@
ext._init_func(ext)
if not self.inplace:
- ext.library_dirs.append(os.path.join(self.build_lib, "pysam"))
+ pass
if sys.platform == 'darwin':
relative_module_path = ext.name.replace(".", os.sep) + get_config_vars()["SO"]
@@ -85,6 +85,5 @@
if not ext.extra_link_args:
ext.extra_link_args = []
- ext.extra_link_args += ['-Wl,-rpath,$ORIGIN']
build_ext.build_extension(self, ext)
--- python-pysam.orig/setup.py
+++ python-pysam/setup.py
@@ -353,7 +353,6 @@
shared_htslib_sources +
os_c_files,
library_dirs=htslib_library_dirs,
- runtime_library_dirs=htslib_library_dirs,
include_dirs=["pysam", "."] + include_os + htslib_include_dirs,
libraries=external_htslib_libraries,
language="c",
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