File: ex3.sam

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python-pysam 0.7.7-1~bpo70%2B1
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@HD	VN:1.0
@SQ	SN:chr1	LN:1575
@SQ	SN:chr2	LN:1584
@RG	ID:L1	PU:SC_1_10	LB:SC_1	SM:NA12891	CN:name:with:colon
@RG	ID:L2	PU:SC_2_12	LB:SC_2	SM:NA12891	CN:name:with:colon
@PG	ID:P1	VN:1.0
@PG	ID:P2	VN:1.1
@CO	this is a comment
@CO	this is another comment
read_28833_29006_6945	99	chr1	33	20	10M1D25M	=	200	167	AGCTTAGCTAGCTACCTATATCTTGGTCTTGGCCG	<<<<<<<<<<<<<<<<<<<<<:<9/,&,22;;<<<	NM:i:1	RG:Z:L1	PG:Z:P1	XT:A:U
read_28701_28881_323b	147	chr2	88	30	35M	=	500	412	ACCTATATCTTGGCCTTGGCCGATGCGGCCTTGCA	<<<<<;<<<<7;:<<<6;<<<<<<<<<<<<7<<<<	MF:i:18	RG:Z:L2	PG:Z:P2	XT:A:R
read_28701_28881_323c	147	chr2	88	30	35M	=	500	412	ACCTATATCTTGGCCTTGGCCGATGCGGCCTTGCA	<<<<<;<<<<7;:<<<6;<<<<<<<<<<<<7<<<<
test_clipped1	99	chr2	997	20	4S6M1D20M5S	=	200	167	AGCTTAGCTAGCTACCTATATCTTGGTCTTGGCCG	<<<<<<<<<<<<<<<<<<<<<:<9/,&,22;;<<<	NM:i:1	RG:Z:L1	PG:Z:P1	XT:A:U