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"""
Copyright 2014-2018, Mario Mulansky <mario.mulansky@gmx.net>
Distributed under the BSD License
"""
from __future__ import absolute_import
__all__ = ["isi_distance", "spike_distance", "spike_sync", "psth",
"spikes", "spike_directionality", "SpikeTrain",
"PieceWiseConstFunc", "PieceWiseLinFunc", "DiscreteFunc"]
from .PieceWiseConstFunc import PieceWiseConstFunc
from .PieceWiseLinFunc import PieceWiseLinFunc
from .DiscreteFunc import DiscreteFunc
from .SpikeTrain import SpikeTrain
from .isi_distance import isi_profile, isi_distance, isi_profile_multi,\
isi_distance_multi, isi_distance_matrix
from .spike_distance import spike_profile, spike_distance, spike_profile_multi,\
spike_distance_multi, spike_distance_matrix
from .spike_sync import spike_sync_profile, spike_sync,\
spike_sync_profile_multi, spike_sync_multi, spike_sync_matrix,\
filter_by_spike_sync
from .psth import psth
from .spikes import load_spike_trains_from_txt, save_spike_trains_to_txt, \
spike_train_from_string, import_spike_trains_from_time_series, \
merge_spike_trains, generate_poisson_spikes
from .spike_directionality import spike_directionality, \
spike_directionality_values, spike_directionality_matrix, \
spike_train_order_profile, spike_train_order_profile_bi, \
spike_train_order_profile_multi, spike_train_order, \
spike_train_order_bi, spike_train_order_multi, \
optimal_spike_train_sorting, permutate_matrix
# define the __version__ following
# http://stackoverflow.com/questions/17583443
from pkg_resources import get_distribution, DistributionNotFound
import os.path
try:
_dist = get_distribution('pyspike')
# Normalize case for Windows systems
dist_loc = os.path.normcase(_dist.location)
here = os.path.normcase(__file__)
if not here.startswith(os.path.join(dist_loc, 'pyspike')):
# not installed, but there is another version that *is*
raise DistributionNotFound
except DistributionNotFound:
__version__ = 'Please install this project with setup.py'
else:
__version__ = _dist.version
disable_backend_warning = False
def NoCythonWarn():
""" Warn exactly once
(called when an import of one of the cython_...so modules failed)
"""
global disable_backend_warning # initialized False in __init__.py
if not disable_backend_warning:
print("Warning: Cython implementation not found." +
" Make sure that PySpike is installed by running\n" +
" 'python setup.py build_ext --inplace'\n" +
"Falling back to slow python backend.\n")
disable_backend_warning = True
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