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|
#!/bin/bash
set -e
DEB_HOST_ARCH=$(dpkg-architecture -qDEB_HOST_ARCH)
# Do not require an installation of pytest-pyvista, since we do not have a cache
# to test against anyways
cat <<EOF >> tests/plotting/conftest.py
@pytest.fixture()
def verify_image_cache(request, pytestconfig):
return lambda plotter: True
EOF
# Disable some tests which are failing
declare -a DISABLED_TESTS
DISABLED_TESTS=(
### TESTS/CORE ###
# tests/core/test_dataset.py::test_partition
# requires vtkRedistributeDataSetFilter, which is not available in debian's vtk
"test_partition"
# tests/core/test_dataset.py::test_multiprocessing [xml or legacy]
# tests/core/test_dataset_filters.py::test_compute_derivatives
# tests/core/test_dataobject_filters.py::test_slice_along_line_composite
# tests/core/test_polydata.py::test_clean
# tests/core/test_polydata.py::test_merge_main_has_priority_deprecated
# flakey test, often segfaults
"test_multiprocessing"
"test_compute_derivatives"
"test_slice_along_line_composite"
"test_clean"
"test_merge_main_has_priority_deprecated"
# tests/core/test_dataset_filters.py::test_sample_over_line
# tests/core/test_dataset_filters.py::test_sample_over_multiple_lines
# tests/core/test_polydata.py::test_point_normals_computes_new_normals
# need to relax the np.allclose tolerance to pass
"test_sample_over_line"
"test_sample_over_multiple_lines"
"test_point_normals_computes_new_normals"
# tests/core/test_dataset_filters.py::test_color_labels_color_type_cmap
# fails with numpy array shape mismatch
"test_color_labels_color_type_cmap"
# tests/core/test_polydata.py::test_n_faces
# does not raise an attribute error
"test_n_faces"
# tests/core/test_datasetattributes.py::test_preserve_field_data_after_extract_cells
# failed at least once on amd64 with
# "Unreliable test timings! On an initial run, this test took 309.45ms, which exceeded the deadline
# of 200.00ms, but on a subsequent run it took 3.58 ms, which did not"
"test_preserve_field_data_after_extract_cells"
# tests/core/test_datasetattributes.py::test_complex_raises
# fails on 32 bit archs armel and i386 due to np.complex256 not being available
"test_complex_raises"
# tests/core/test_helpers.py::test_wrap_pyvista_ndarray_vtk
# RuntimeWarning: invalid value encountered in cast
"test_wrap_pyvista_ndarray_vtk"
# tests/core/test_imaging.py::test_sample_function[uint64]
# tests/core/test_imaging.py::test_sample_function[int64]
# fails on 32 bit archs armel and i386 due to 64-bit integers not being available
"test_sample_function[uint64]"
"test_sample_function[int64]"
# tests/core/test_imagedata_filters.py::test_contour_labeled
# tests/core/test_imagedata_filters.py::test_contour_labeled_with_smoothing
# tests/core/test_imagedata_filters.py::test_contour_labeled_with_boundary_output_style
# asserts randomly fail due to maximum values different from the expected ones
"test_contour_labeled"
"test_contour_labeled_with_smoothing"
"test_contour_labeled_with_boundary_output_style"
# tests/core/test_reader.py::test_nrrd_reader
# fails with debian's vtk with error message
# "No whole extent has been set in the information for output port 0 on algorithm vtkPNrrdReader"
"test_nrrd_reader"
"test_pad_image_raises"
"test_points_to_cells_and_cells_to_points_dimensions"
"test_pad_image_multi_component_with_scalar"
# tests/core/test_reader.py::test_hdf_reader
# fails on arm64, armel, ppc64el, s390x with
# Unknown native datatype: 216172782113784226', 'vtkHDFReaderImplementation.cxx'
"test_hdf_reader"
# tests/core/test_reader.py::test_xdmf_reader
# requires vtkmodules.vtkIOXdmf2, which seems not be available with debian's vtk
"test_xdmf_reader"
# tests/core/test_reader.py::test_openfoamreader_read_data_time_point
# tests/core/test_reader.py::test_openfoamreader_read_data_time_value
# need to relax the np.iclose tolerance to pass on i386
"test_openfoamreader_read_data_time_point"
"test_openfoamreader_read_data_time_value"
# tests/core/test_utilities.py::test_lines_segments_from_points
# exceeds timeout on riscv64
"test_lines_segments_from_points"
# tests/core/test_datasetattributes.py and
# tests/core/test_geometric_objects.py
# hypothesis input generation is too slow and gives error
"test_set_array_string_lists_should_equal"
"test_set_array_string_array_should_equal"
"test_box_source_bounds_raise"
"test_pyramid_raises"
"test_quadrilateral_raises"
### TESTS/PLOTTING ###
# tests/plotting/test_plotting.py::test_set_environment_texture_cubemap
# seems to hang
"test_set_environment_texture_cubemap"
# tests/plotting/test_plotting.py::test_ssaa_pass
# does not raise a runtime error
"test_ssao_pass"
# tests/plotting/test_theme.py::test_load_theme
# tests/plotting/test_theme.py::test_save_before_close_callback
# each one of these tests requires trame
"test_load_theme"
"test_save_before_close_callback"
# tests/plotting/test_theme.py::test_anti_aliasing_fxaa
# fails garbage collection
"test_anti_aliasing_fxaa"
# tests/plotting/test_plotting.py::test_plot_nan_color
# tests/plotting/test_render_window_interactor.py::test_timer
# randomly gives segmentation faults
"test_plot_nan_color"
"test_timer"
# tests/plotting/test_renderer.py::test_show_bounds_padding_raises
# exceeds timeout on ppc64el
"test_show_bounds_padding_raises"
# tests/plotting/test_renderer.py
# hypothesis input generation is too slow and gives error
"test_init_renderers_groups_item_len_raises"
### TESTS/NAMESPACE ###
# tests/namespace/test_utilities_namespace.py::test_utilities_namespace
# does not emit the required warning
"test_utilities_namespace"
### TESTS/TYPING ###
# tests/typing/mypy_plugin/test_plugin.py::test_promote_type_static
# requires mypy
"test_promote_type_static"
)
# test needing network access are tested separately in run-unit-tests-network
NETWORK_TESTS=(
test_download
test_download_files
test_dataset_loader
test_examples
test_meshio
test_protein_ribbon # core/test_polydata_filters.py
test_reader
test_composite
test_user_logo
test_actor_texture
test_import_3ds
test_remove_environment_texture_cubemap
test_import_obj_with_texture
test_import_obj
test_voxelize_volume
test_property_pbr
test_get_background_texture
test_brush
test_logo_widget
)
DISABLED_TESTS=("${DISABLED_TESTS[@]}" "${NETWORK_TESTS[@]}")
if [ "${DEB_HOST_ARCH}" = "i386" ] ; then
DISABLED_TESTS=("${DISABLED_TESTS[@]}"
# fails GC
test_plot_logo
# fails numerical check (isclose)
test_rotate_should_match_vtk_rotation
test_principal_axes
test_transform_with_point
test_translate_direction_collinear
test_connectivity_closest_point
test_connectivity_largest
test_connectivity_cell_seed
test_connectivity_specified
test_connectivity_all
test_connectivity_point_seed
test_compute_boundary_mesh_quality
test_streamlines_max_length
# fails regex pattern
test_validate_dim_operation_invalid_parameters
#ValueError: negative dimensions are not allowed
test_voxelize_binary_mask_cell_length_sample_size
)
fi
if [ "${DEB_HOST_ARCH}" = "riscv64" ] ; then
# times out
DISABLED_TESTS=("${DISABLED_TESTS[@]}"
test_axis_scale
)
fi
if [ "${DEB_HOST_ARCH}" = "s390x" ] ; then
DISABLED_TESTS=("${DISABLED_TESTS[@]}"
# fails GC
test_import_gltf test_remove_vertices_actor
# times out
test_volume_rendering_rectilinear
# fails VTKHDF I/O
test_save
test_user_dict_write_read
)
fi
DISABLED_TESTS_SEPARATOR=" or "
DISABLED_TESTS_STRING=$(printf "${DISABLED_TESTS_SEPARATOR}%s" "${DISABLED_TESTS[@]}")
DISABLED_TESTS_STRING=${DISABLED_TESTS_STRING:${#DISABLED_TESTS_SEPARATOR}}
# Print report about pyvista installation
python3 -c "import pyvista; print(pyvista.Report())"
# Run the remaining tests through xvfb-run, since plotting tests require a
# virtual frame buffer
# Default python only, since vtk9 only builds for it.
for py in `py3versions -dv`; do
xvfb-run -a python$py -P -m pytest \
-k "not (${DISABLED_TESTS_STRING})" \
-vv --random-order \
tests
done
|
