1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
|
============
Release v0.5
============
We are proud to announce the release of screed v0.5. screed is a database engine
capable of storing and retriving short-read sequence data. screed is designed
to be fast and adaptable to different sequence file formats. This marks the
first release of screed which we consider stable and complete.
Features:
- Read sequence data from FASTA/FASTQ files into screed databases
- Save screed databases back to FASTA/FASTQ files
- Lookup sequence data by index (offset) or name
- Native support for sequence substring slicing
- Convert between FASTA <-> FASTQ file formats
screed is written entirely in Python and uses the Sqlite database for backend
storage. screed can be downloaded from the public git repository:
http://github.com/acr/screed.git
screed is licensed under the BSD license which can be viewed in the
doc/LICENSE.txt file.
|
