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from __future__ import absolute_import, unicode_literals, print_function
from screed import Record
import pytest
def test_create_quality_none():
r = Record(name='foo', sequence='ATGACG', quality=None)
assert not hasattr(r, 'quality')
def test_len():
r = Record(name='foo', sequence='ATGACG')
assert len(r) == 6
# copied over from khmer tests/test_read_parsers.py
def test_read_type_basic():
name = "895:1:1:1246:14654 1:N:0:NNNNN"
sequence = "ACGT"
r = Record(name, sequence)
assert r.name == name
assert r.sequence == sequence
assert not hasattr(r, 'quality'), x
assert not hasattr(r, 'annotations'), x
# copied over from khmer tests/test_read_parsers.py
def test_read_type_attributes():
r = Record(sequence='ACGT', quality='good', name='1234', annotations='ann')
assert r.sequence == 'ACGT'
assert r.quality == 'good'
assert r.name == '1234'
assert r.annotations == 'ann'
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