from seqcluster.libs.seqviz import seqviz START1= ''' clusters information ''' START2=''' ''' JSSTART= ''' clusters information ''' END="" STABLE='' SHR="" ETABLE="
" EHR="\n" HEADER_SEQ=["sequence","size"] HEADER_L=["position","annotation (element:strand)-(distance to 5,distance to 3)"] def tab2table(file,output): f = open(file, 'r') header=f.readline().strip() for line in f: line=line.strip() cols = line.split("\t") f.close() return 0 def make_cell(cell): return "%s" % str(cell) def make_hs_link(id): return "show hide" % (id,id) def make_cell_link(cell,link): return "%s" % (link,str(cell)) def make_line(line): return SHR+line+EHR def make_table(c,name): tmp=STABLE return "%s %s %s " % (tmp,c,ETABLE) def make_div(c,name,css): return "
%s
" % (css,name,name,c) def make_jshtml(c,name): tmp=JSSTART return "%s %s %s " % (tmp,c,END ) def make_html(c,showseq,name): header=START1+showseq+START2 return "%s %s %s " % (header,c,END) def make_header(c): return "%s" % c def make_cell_header(c): return "%s\n" % c def make_a(c,name): return "%s\n" % (name,c) def make_link(c,link): return "%s" % (link,c)