File: run.sh

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python-seqcluster 1.2.9%2Bds-3
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seqcluster seqbuster --sps hsa --hairpin hairpin.fa --mirna miRNA.str -o test_out_mirs_sam sim_isomir.sam 

seqcluster seqbuster --sps hsa --hairpin hairpin.fa --mirna miRNA.str -o test_out_mirs_fa sim_isomir.fa 

seqcluster seqbuster --sps hsa --hairpin hairpin.fa --mirna miRNA.str -o test_out_mirs_fq sim_isomir.fastq