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# Sigima setup configuration file
[project]
name = "sigima"
authors = [{ name = "Pierre Raybaut", email = "p.raybaut@codra.fr" }]
maintainers = [
{ name = "DataLab Platform Developers", email = "p.raybaut@codra.fr" },
]
description = "Scientific computing engine for 1D signals and 2D images, part of the DataLab open-source platform."
readme = "README.md"
license = { file = "LICENSE" }
classifiers = [
"Development Status :: 4 - Beta",
"Intended Audience :: Developers",
"Intended Audience :: Education",
"Intended Audience :: Science/Research",
"Intended Audience :: End Users/Desktop",
"Operating System :: MacOS :: MacOS X",
"Operating System :: Microsoft :: Windows :: Windows 7",
"Operating System :: Microsoft :: Windows :: Windows 8",
"Operating System :: Microsoft :: Windows :: Windows 10",
"Operating System :: Microsoft :: Windows :: Windows 11",
"Operating System :: POSIX :: Linux",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Programming Language :: Python :: 3.13",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Image Processing",
"Topic :: Software Development :: Libraries :: Python Modules",
]
requires-python = ">=3.9, <4"
dependencies = [
"guidata >= 3.13",
"NumPy >= 1.22",
"SciPy >= 1.10.1",
"scikit-image >= 0.19.2",
"pandas >= 1.4",
"PyWavelets >= 1.2",
"packaging >= 21.3",
"typing-extensions >= 4.0",
"makefun >= 1.13.1",
]
dynamic = ["version"]
[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"
[project.urls]
Homepage = "https://github.com/DataLab-Platform/Sigima"
Documentation = "https://sigima.readthedocs.io/"
[project.optional-dependencies]
opencv = ["opencv-python-headless >= 4.8.1.78"]
dev = ["build", "babel","ruff", "pylint", "Coverage", "pre-commit"]
doc = [
"sphinx",
"sphinx-gallery",
"sphinx_intl",
"myst_parser",
"sphinx_design",
"sphinx-copybutton",
"pydata-sphinx-theme",
"sphinx-gallery",
"qtpy",
"PyQt5",
"plotpy",
"opencv-python-headless >= 4.8.1.78",
]
test = ["pytest", "pytest-xvfb"]
qt = ["qtpy", "PyQt5", "plotpy"]
[tool.setuptools.packages.find]
include = ["sigima*"]
[tool.setuptools.package-data]
"*" = [
"*.pdf",
"*.png",
"*.svg",
"*.mo",
"*.txt",
"*.json",
"*_test.h5",
"*.h5ima",
"*.h5sig",
"*.npy",
"*.dcm",
"*.scor-data",
"*.tiff",
"*.jpg",
"*.sif",
"*.csv",
"*.mca",
"*.mat",
"*.js",
"*.css",
"*.html",
"*.buildinfo",
"*.inv",
]
[tool.setuptools.dynamic]
version = { attr = "sigima.__version__" }
[tool.pytest.ini_options]
addopts = "sigima --import-mode=importlib"
filterwarnings = [
# Ignore specific deprecation warnings from external libraries
"ignore::DeprecationWarning:pandas.*",
"ignore::DeprecationWarning:scipy.*",
# Ignore specific user warnings from Sigima (expected behavior)
"ignore:Multiple crossing points found. Returning last.:UserWarning:sigima.*",
]
[tool.ruff]
exclude = [".git", ".vscode", "build", "dist", "*.ipynb"]
line-length = 88 # Same as Black.
indent-width = 4 # Same as Black.
target-version = "py39" # Assume Python 3.9.
[tool.ruff.lint]
# all rules can be found here: https://beta.ruff.rs/docs/rules/
select = [
"D202", # No blank lines allowed after function docstring.
"D403", # First word of docstring should be properly capitalized.
"E", # Pycodestyle error
"F", # Pyflakes
"I", # Isort
"NPY201", # Numpy-specific checks
"RUF022", # Unsorted __all__
"W" # Pycodestyle warning
]
ignore = [
"E203", # space before : (needed for how black formats slicing)
]
[tool.ruff.format]
quote-style = "double" # Like Black, use double quotes for strings.
indent-style = "space" # Like Black, indent with spaces, rather than tabs.
skip-magic-trailing-comma = false # Like Black, respect magic trailing commas.
line-ending = "auto" # Like Black, automatically detect the appropriate line ending.
[tool.ruff.lint.per-file-ignores]
"doc/*" = ["E402"]
[tool.ruff.lint.pydocstyle]
convention = "google"
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