File: gcn.py

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pytorch-geometric 2.6.1-7
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import os.path as osp

import torch
import torch.nn.functional as F
from torch import Tensor

import torch_geometric.transforms as T
from torch_geometric.datasets import Planetoid
from torch_geometric.nn import GCNConv

device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
path = osp.join(osp.dirname(osp.realpath(__file__)), 'data', 'Planetoid')
dataset = Planetoid(path, 'Cora', transform=T.NormalizeFeatures())
data = dataset[0]


class GCN(torch.nn.Module):
    def __init__(self, in_channels: int, hidden_channels: int,
                 out_channels: int):
        super().__init__()
        self.conv1 = GCNConv(in_channels, hidden_channels)
        self.conv2 = GCNConv(hidden_channels, out_channels)

    def forward(self, x: Tensor, edge_index: Tensor) -> Tensor:
        x = F.dropout(x, p=0.5, training=self.training)
        x = self.conv1(x, edge_index).relu()
        x = F.dropout(x, p=0.5, training=self.training)
        x = self.conv2(x, edge_index)
        return x


model = GCN(dataset.num_features, 16, dataset.num_classes)
model = torch.jit.script(model).to(device)
data = data.to(device)
optimizer = torch.optim.Adam([
    dict(params=model.conv1.parameters(), weight_decay=5e-4),
    dict(params=model.conv2.parameters(), weight_decay=0)
], lr=0.01)  # Only perform weight-decay on first convolution.


def train():
    model.train()
    optimizer.zero_grad()
    out = model(data.x, data.edge_index)
    loss = F.cross_entropy(out[data.train_mask], data.y[data.train_mask])
    loss.backward()
    optimizer.step()
    return float(loss)


@torch.no_grad()
def test():
    model.eval()
    pred = model(data.x, data.edge_index).argmax(dim=-1)

    accs = []
    for mask in [data.train_mask, data.val_mask, data.test_mask]:
        accs.append(int((pred[mask] == data.y[mask]).sum()) / int(mask.sum()))
    return accs


best_val_acc = final_test_acc = 0
for epoch in range(1, 201):
    loss = train()
    train_acc, val_acc, tmp_test_acc = test()
    if val_acc > best_val_acc:
        best_val_acc = val_acc
        test_acc = tmp_test_acc
    print(f'Epoch: {epoch:03d}, Loss: {loss:.4f}, '
          f'Train: {train_acc:.4f}, Val: {val_acc:.4f}, Test: {test_acc:.4f}')