File: test_to_dense.py

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pytorch-geometric 2.6.1-7
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import torch

from torch_geometric.data import Data
from torch_geometric.transforms import ToDense


def test_to_dense():
    edge_index = torch.tensor([[0, 0, 0, 1, 2, 3], [1, 2, 3, 0, 0, 0]])
    edge_attr = torch.tensor([1.0, 2.0, 3.0, 4.0, 5.0, 6.0])
    num_nodes = edge_index.max().item() + 1
    x = torch.randn((num_nodes, 4))
    pos = torch.randn((num_nodes, 3))
    y = torch.randint(0, 4, (num_nodes, ), dtype=torch.long)

    transform = ToDense()
    assert str(transform) == 'ToDense()'
    data = Data(x=x, pos=pos, edge_index=edge_index, edge_attr=edge_attr, y=y)
    data = transform(data)
    assert len(data) == 5
    assert data.x.tolist() == x.tolist()
    assert data.pos.tolist() == pos.tolist()
    assert data.y.tolist() == y.tolist()
    assert data.adj.size() == (num_nodes, num_nodes)
    assert data.adj.tolist() == [
        [0, 1, 2, 3],
        [4, 0, 0, 0],
        [5, 0, 0, 0],
        [6, 0, 0, 0],
    ]
    assert data.mask.tolist() == [1, 1, 1, 1]

    transform = ToDense(num_nodes=5)
    assert str(transform) == 'ToDense(num_nodes=5)'
    data = Data(x=x, pos=pos, edge_index=edge_index, edge_attr=edge_attr, y=y)
    data = transform(data)
    assert len(data) == 5
    assert data.x.size() == (5, 4)
    assert data.x[:4].tolist() == x.tolist()
    assert data.x[4].tolist() == [0, 0, 0, 0]
    assert data.pos.size() == (5, 3)
    assert data.pos[:4].tolist() == pos.tolist()
    assert data.pos[4].tolist() == [0, 0, 0]
    assert data.y.size() == (5, )
    assert data.y[:4].tolist() == y.tolist()
    assert data.y[4].tolist() == 0
    assert data.adj.size() == (5, 5)
    assert data.adj.tolist() == [
        [0, 1, 2, 3, 0],
        [4, 0, 0, 0, 0],
        [5, 0, 0, 0, 0],
        [6, 0, 0, 0, 0],
        [0, 0, 0, 0, 0],
    ]
    assert data.mask.tolist() == [1, 1, 1, 1, 0]