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@article{bokulich2018optimizing,
author={Bokulich, Nicholas A. and Kaehler, Benjamin D. and Rideout, Jai Ram and Dillon, Matthew and Bolyen, Evan and Knight, Rob and Huttley, Gavin A. and Caporaso, J. Gregory},
title={Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin},
journal={Microbiome},
year={2018},
volume={6},
number={1},
pages={90},
doi={10.1186/s40168-018-0470-z},
url={https://doi.org/10.1186/s40168-018-0470-z}
}
@article{pedregosa2011scikit,
title={Scikit-learn: Machine learning in Python},
author={Pedregosa, Fabian and Varoquaux, Ga{\"e}l and Gramfort, Alexandre and Michel, Vincent and Thirion, Bertrand and Grisel, Olivier and Blondel, Mathieu and Prettenhofer, Peter and Weiss, Ron and Dubourg, Vincent and Vanderplas, Jake and Passos, Alexandre and Cournapeau, David and Brucher, Matthieu and Perrot, Matthieu and Duchesnay, {\'E}douard},
journal={Journal of machine learning research},
volume={12},
number={Oct},
pages={2825--2830},
year={2011}
}
@article{camacho2009blast+,
title={BLAST+: architecture and applications},
author={Camacho, Christiam and Coulouris, George and Avagyan, Vahram and Ma, Ning and Papadopoulos, Jason and Bealer, Kevin and Madden, Thomas L},
journal={BMC bioinformatics},
volume={10},
number={1},
pages={421},
year={2009},
publisher={BioMed Central},
doi={10.1186/1471-2105-10-421}
}
@article{rognes2016vsearch,
title={VSEARCH: a versatile open source tool for metagenomics},
author={Rognes, Torbj{\o}rn and Flouri, Tom{\'a}{\v{s}} and Nichols, Ben and Quince, Christopher and Mah{\'e}, Fr{\'e}d{\'e}ric},
journal={PeerJ},
volume={4},
pages={e2584},
year={2016},
publisher={PeerJ Inc.},
doi={10.7717/peerj.2584}
}
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